Entry |
|
Name |
|
KO |
|
Organism |
rno Rattus norvegicus (rat)
|
Pathway |
rno05170 | Human immunodeficiency virus 1 infection |
|
Brite |
KEGG Orthology (KO) [BR:rno00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134482489
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
134482489
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
134482489
09162 Cancer: specific types
05211 Renal cell carcinoma
134482489
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
134482489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:rno04121]
134482489
03400 DNA repair and recombination proteins [BR:rno03400]
134482489
Ubiquitin system [BR:rno04121]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Adoptor protein
134482489
Cul5 complex
134482489
DNA repair and recombination proteins [BR:rno03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
134482489
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
16:22414747..22415199
|
AA seq |
136 aa
MTASRPRQETSKFLWDQVEFYKNIMDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHA
LTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA
PEIALELLMAVNFLDC |
NT seq |
411 nt +upstreamnt +downstreamnt
atgactgcttctcggcctcgccaggaaactagtaagttcctctgggatcaagtagaattt
tataagaacataatggatggagaggagaaaacctatggtggctgtgaaggccctgatgcc
atgtatgtgaaattaatatcttctgatggtcatgaatttattgtaaaaagagaacatgca
ttaacatcaggaacaataaaggccatgttgagtggtccaggtcagtttgcggagaatgaa
accaatgaggtcaactttagagagatcccttcacatgtgctatcgaaagtgtgcatgtat
tttacctacaaggtccgctatactaacagctccactgaaattcctgaattcccaattgca
cctgaaattgcactggaactgctgatggccgtgaacttcttagattgttaa |