Rattus norvegicus (rat): 140722
Help
Entry
140722 CDS
T01003
Symbol
Caskin1
Name
(RefSeq) caskin-1
KO
K21952
CASK-interacting protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
140722 (Caskin1)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
140722 (Caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Caskin-Pro-rich
Ank_4
Caskin-tail
SAM_2
Ank_3
Caskin1-CID
SH3_2
Ank_KRIT1
SH3_1
SH3_9
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
140722
NCBI-ProteinID:
NP_542421
RGD:
620191
Ensembl:
ENSRNOG00000003195
UniProt:
Q8VHK2
A0A8J8XK13
LinkDB
All DBs
Position
10:14016780..14037927
Genome browser
AA seq
1430 aa
AA seq
DB search
MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGRKEPMKLVLKAGSAVNVPSDEGHIPLH
LAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPR
PGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKSGTALHEAALCGKTEVVRLL
LDSGINAQVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAALQVRATKDYCNNYDLTS
LNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSLGEAIVKRAGSRTGSEPSPP
QGGGSLGPSAPPEEIWVLRKPFAGGDRSGSLSNVAGGRSTGGHALHAGAEGVKLLATVLS
QKSVSESSPGDSPVKPPEGSSGAARSQPPAAHAGQVYGEQPPKKLESSSASEGKSAEAVS
QWLATFQLQLYAPNFTSAGYDLPTISRMTPEDLTAIGVTKPGHRKKITAEISGLNIPDCL
PEHKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLA
VRKLAELQKAEYSKYEGGPLRRKAPQSLEMMAIESPPPSEPAAAECQSPKMTTFQDSELS
GELQAALSGPAEAGAAAAEKSSNHLPATPRTTSRQESSLSGRARHMSSSQELLGDGPQGP
GSPMSRSQEYLLDEGPAPGTPPKEVRSSRHGHSVKRASVPPVPGKPRQVLPSGVSHFTPP
QTPTKAQPGSPQALGGPHGPATAKVKPTPQLLPPTDRPMSPRSLPQSPTHRGFAYVLPQP
VEGEAGPPAPGPVPPPVPAAVPTLCLPPEADVEPGRPKKRAHSLNRYAASDSEPERDELL
VPAAAGPYATVQRRVGRSHSVRAPAGTDKNVNRSQSFAVRPRKKGPPPPPPKRSSSAMAS
ANLADEPSPDVETEDGRLGVRAQRRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRA
IRRPPEGHPTPRPASPDPGRVATVLASVKHKEAIGPDGEVVNRRRTLSGPVTGLLATARR
GPGEPAEQSHFMEDGTARQRLRGPAKGEAGVEGPPLARVEASATLKRRIRAKQSQQENVK
FILTESDTVKRRPKAKEPDIGPEPPPPLSVYQNGTATIRRRPASEQAGPPELPPPPPPAE
PPPTDLMPLPPLPLPDGSARKPVKPPVSPKPILAQPVSKIQGSPTPASKKVPLPGPGSPE
VKRAHGTPPPVSPKPPPPPTAPKPAKALAGLQSSSATPSPVPSPARQPPAALIKPASSPP
SQSASPAKPPSPGAPALQVPTKPPRAAASVVSGPPVASDCASPGDSARQKLEETSACLAA
ALQAVEEKIRQEDGQGPRPSSIEEKSTGSILEDIGSMFDDLADQLDAMLE
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaggagctggtgcaggcagtgaaggcggaggacgtggggaccgcgcag
aggctgctgcagaggccgcggccggggaaggccaagctcctgggctctaccaagaagatc
aatgtcaacttccaggacccagatggcttctcagccctgcaccatgctgccctgaatggc
aacaccgaattgatctctctgctgctggaggctcaggctgctgtagacatcaaggacaac
aaaggcatgcggccgctgcactacgcggcctggcagggccggaaggagcccatgaagctg
gtgctgaaggcaggctcagcagtgaatgtcccatccgacgagggccacatacccctgcat
ttggctgcccagcatggtcactacgatgtgtcagagatgctactgcagcatcagtccaac
ccctgcatggtagacaactccggaaagacacctctggacctggcctgcgagtttggccgc
gtaggggtggtccagctgctgctaagtagcaacatgtgtgcggccctgctggagccccga
ccaggggacaccactgatcccaacggtaccagtcccctgcacctggccgccaagaatggc
cacatcgacataattaggctcctcctccaggccggcatcgacattaaccgccagaccaag
tctggcacagcccttcatgaggctgcactctgtgggaagacagaagtggtccggctactg
ctggatagtgggatcaatgcccaggtgaggaacacctacagccagacagcactggacatc
gtgcaccaatttactacatcccaggccagcaaggagatcaagcaactgcttcgagaggct
tcagcggctctccaggtccgggctacaaaggattactgtaacaattatgatctgaccagt
ctcaatgtgaaggctggggacattatcacggtacttgaacagcatccagatggccggtgg
aaaggctgtatccatgacaaccggacaggcaatgacagggtgggctacttcccatcctcg
ctgggggaggctattgtcaagcgagccggttcccggacaggcagcgagccaagcccaccc
cagggaggtggctcactgggtccctccgcacccccggaggagatctgggtgctgaggaag
ccttttgcaggtggagatcgcagtggcagcttgagcaatgtggctgggggcaggagtact
gggggccatgccctgcatgcaggcgctgaaggggttaagctcctggcaactgtgctttcc
cagaagtcagtctccgagtccagcccaggagatagcccggtcaagcctcctgagggctct
tcaggtgctgcccggtcccagcctccagcagcccatgctgggcaggtatatggggagcag
ccacccaagaagctggaatcgtcctcggcctctgagggcaagagtgctgaggcagtcagt
cagtggcttgccacattccagctacagctctatgcccccaacttcaccagtgctggctat
gacctgcccaccatcagtcgcatgacccctgaggacctcacagccattggtgttaccaag
ccaggccaccgtaagaagattacggcagagatcagcggcctgaacatccctgactgcctg
cctgaacacaaacccgctaacctggctgtgtggctgtcaatgattggtctggcccagtat
tacaaggtgctggtggacaacggctatgagaacattgatttcatcaccgatatcacttgg
gaggacctgcaggagatcggcatcaccaagctgggacaccaaaagaagctgatgctggcg
gtgaggaaactggcagagctgcaaaaggcagaatactccaagtatgaggggggaccgctg
cgccgaaaggcaccccagtcacttgaaatgatggccatcgagtcaccacccccatctgag
cctgctgcagcagagtgccagtctcctaagatgaccaccttccaggacagtgagctcagt
ggtgagctgcaggctgccttgtccggcccagctgaagcaggtgcagctgctgccgagaaa
tcctccaaccacctgccagccactccgaggacaacctcgcgacaggagtccagcctgagt
ggacgggctcggcacatgagcagctctcaggagctgctgggtgatgggcctcaggggccg
ggcagtcctatgtcacgaagtcaggaataccttctggatgagggtccagctcctggcacc
ccacccaaggaggtgcggtctagccgccatggccacagtgtcaagagggccagtgtgccc
ccagtgcctggcaagccacgacaggtccttccatccggtgtcagccacttcacgccccca
cagacgcccaccaaagctcagccaggctcccctcaggcccttgggggacctcatggtcca
gccacagccaaggtgaagcccaccccacagctgctaccaccaacagaccgacccatgtca
ccccgttccctgcctcagtcacccacacaccgtggctttgcttacgtgctgccccaacca
gttgagggtgaggcagggccacccgctccaggacctgtgcccccaccggtaccagcagct
gtgcccacactatgcttgcccccagaagctgatgtagagcctgggcggcccaagaaacgt
gcccacagcttgaatcgctatgcagcgtccgacagcgagcccgagcgggatgagctgctg
gtgcctgctgccgctggaccctatgccacagtccagcggcgtgtgggtcggagccattca
gtgagggctcctgctggcactgacaagaacgttaaccgcagccagtcctttgctgtgcgg
ccacgtaagaaggggcccccaccccctccacccaaacgctccagctcagccatggctagc
gccaacctagctgatgagccgtctccagatgttgagacagaggatggccggctgggggtc
cgggcacaacgccggcgggctagtgatctcgctggcagtgtggacacaggcagtgctggc
agtgtgaagagcatcgcagccatgttggagctgtcttccattgggggtggggggcgagct
attcgcaggccccccgaaggccaccccacacctcgtcctgccagtccagacccgggcaga
gtagctaccgtgttggcctctgtaaagcacaaagaggccattgggcctgacggtgaagtg
gtgaaccggcgccgtacactcagtggcccagtcactggacttttggccactgctcgccgg
ggacctggggaacctgcagagcagagtcattttatggaggatggcacggcccgacaacgg
cttcgaggtccagccaagggtgaggcaggtgtggagggtcctccccttgcccgggtagag
gccagcgccacactcaagaggcgcatccgggccaagcagagccaacaggagaatgtcaag
ttcatcctgacagagtctgacacagtcaagcgcaggcccaaggctaaggagcctgacatt
gggcctgagccacccccaccactgtccgtgtatcagaatggcacagccaccatccgccga
cggccagcctcagagcaggctgggcccccagagctgccccctcctcctccacctgccgag
cccccacccactgacctgatgccactgcctccactgcccctgcctgatggcagtgcacgg
aagccggtgaagccacccgtctctcccaagcccattctggctcagcctgtgtccaagatc
cagggctcacctacacctgcctccaagaaggtgccactgccaggccctggcagcccagag
gtaaagcgtgctcacggcacgccaccgcctgtgtcacccaagcctccaccgccacctaca
gcgcctaagccagccaaggctttggcgggactgcagtccagcagcgccaccccctcgcct
gtgccctcgccggcgcgtcagccgccagcagccctcatcaagccagctagctcaccgccc
tcgcagagcgccagccccgccaagcccccttccccaggggcacctgcgctgcaagtaccc
accaagccccctcgcgctgccgcttcagtggtctccggacccccagtagcttcagattgt
gcttcgcccggggacagtgctcggcagaagctggaagagactagcgcgtgtttggctgca
gcactgcaggcggtggaggagaagatcaggcaggaagacggacaaggccctcgcccctcc
tccatcgaggagaagagcactggcagcatcctggaagacatcggcagcatgtttgacgac
ctggccgaccagctggacgccatgctggagtga
DBGET
integrated database retrieval system
