Rattus norvegicus (rat): 140934
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Entry
140934 CDS
T01003
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
140934 (Elp1)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
140934 (Elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
140934
NCBI-ProteinID:
NP_543175
RGD:
620072
Ensembl:
ENSRNOG00000016725
UniProt:
Q8VHU4
F1LP76
A6KDR5
LinkDB
All DBs
Position
5:complement(76248545..76300985)
Genome browser
AA seq
1331 aa
AA seq
DB search
MRNLKLHQTLEFRDIQAPGKPQCFCLRAEQGTVLIGSERGLTEVDPVKKEVKTEISLVAE
GFLPEDGSGCIVGIQDLLDQESVCVATASGDVIVCNVSTQQLECVGNVASGISVMSWSPD
QELLLLATAQQTLIMMTRDYEVITEQQIHQDDFGEGKFITVGWGSKDTQFHGSEGRPITF
PVQMHESALSWDDHRPQITWRGDGQFFAVSVVCSQTGARKIRVWNREFALQSTSESVPGL
GPSLAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGYFTLPFLKDEVKVNDLLWNADSSV
LAVWLEDLPKEGSSTLKSYVQLWTVGNYHWYLKQSLPFSTTGKNQIVSLLWDPVTPGRLH
VLCQGWRYLCCDWHWTTDRSSGNSADDLANVAVIDGNKVLVTVFQRTVTPPPMCTYRLLI
PHPVNQVMFSAHLGNDLAVLDASNQISVYKCDDKPDMDSTVKLGAVGGTGFKVPLRTPHL
EKRYRIQFGNKEEEEDVSPLQFRFLTWIEGDAFLAISHSHSSPQSIIHHLTMAGSEGDEE
QGQLNVSSSVTVDGVVIGLCCCSKTKSSAVQLADGQVLKYLWESPSSAVEPWKNSEGRPV
RFARPCTQMEAAAIGGEECVLGLTDRCRFFINDTEVASNITSFAVCDDFLLVTTHSHTCQ
CFSLSGASLKMLQAGLCGSQVPSGEILRKVERGSRIVTVVPQDTKLILQMPRGNLEVVHH
RALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIKQIDSVNHLN
LFFTELKEEDVTKTMYPPPVTKSVQVSTNPDGKKVDLICDAMRVAMETINPRKFCLSILT
SHVKKTTPELDIVLQKVHELQGKIPFEPESVSAEEALKYLLLLVDVNELFNHSLGTYDFD
LVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKALGHLSKCGPEYFTEC
LNLIKDKNLYKEALKLYRPDSPQYQAVSVAYGEHLVQEHLYEPAGLVFARCGAHEKALEA
FLACGSWQQALCMAAQLQMAKDKVAGLARTLAGKLVEQRKHSEAATVLEQYAQDYEEAVL
LLLEGSAWEEALRLVYKYDRVDIIETSVKPSILEAQKNYMDFLDSQTATFIRHKNRLKVV
RELKSQAPRVHVDHEVAHGRETDLFSETSSIRSGSEMSGRYSHSNSRISARSSKNRRKAE
RKKHSLKEGSPLEGLALLEALSEVVQSIEKLKDEVHAILKVLFLFEFEEQARELQRAFES
TLQLMGTALPDIWTLTGQQSSATPVLGPSSTVNSIMASYQQQKTCVPVLDAWACLPPKID
QRSQWKLSLLE
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctgaagttgcatcagaccctggaatttagggacattcaggcaccagggaaa
cctcagtgtttctgtctgcgagctgaacaggggacagttctgattggctcagaacgtgga
ctgacagaagtagatcctgtgaaaaaagaagtgaagactgaaatttctttggtggcagaa
ggttttcttccagaggatggaagtggctgcattgtgggtattcaggacttgctggatcaa
gaatctgtgtgtgtggccactgcctctggggacgtcatagtctgcaatgtcagcacacag
cagctggaatgtgttgggaatgtggccagtggtatctctgtcatgagctggagtcctgat
caagaactgctgctgcttgccacagctcaacagaccctgattatgatgacaagagactat
gaagtaatcacagagcagcagatccaccaggatgattttggagaaggcaagtttatcacc
gttggatggggcagtaaggacacgcagttccacggctcagaaggcaggccaataaccttt
ccggtgcaaatgcatgagtctgccttgtcctgggatgaccacagaccacaaattacctgg
cgtggggatgggcaattttttgctgtgagtgttgtttgctcacaaacaggggctcggaaa
atccgagtatggaaccgagagtttgccttgcagtcaaccagtgagtctgtgccagggctg
gggccctccctggcttggaaaccctcaggcagtctgattgcatctactcaggataaaccc
aaccagcaagacgttgtgttttttgagaaaaatggacttcttcatgggtattttacactt
cctttcttgaaagatgaagttaaggtaaatgacttgctgtggaatgcagattcctcggtg
cttgctgtgtggctagaagacctcccgaaggaaggcagttccactctgaaaagctatgtc
cagctctggaccgtggggaactatcactggtatctcaagcaaagcctgcccttcagcacc
acggggaagaaccagatcgtgtctctgctgtgggacccagtgacgccgggccgactgcat
gttctctgtcagggctggcggtatctatgctgtgactggcactggaccactgatcggagc
tctggaaatagtgccgatgacttggcaaatgtggctgtcattgatggaaacaaggtgttg
gtaacagtcttccagcggactgtgaccccacctcccatgtgtacctaccggctgctgatc
ccacatccagtgaatcaagtcatgttctctgctcaccttggaaatgaccttgctgtcctt
gacgccagtaaccagatttctgtctacaagtgtgatgataaaccagacatggattccaca
gtgaaactaggagctgtgggtggaactggatttaaagttcctcttagaacacctcatctg
gaaaaaagatacaggattcagtttgggaacaaggaagaggaggaggatgtaagcccactg
caatttcgatttctcacctggattgaaggtgacgctttcctggccataagccacagtcac
tccagcccacagtccatcattcaccatctgactatggccggttctgagggggatgaggaa
caaggacagctgaatgtcagttcatctgtgacagtggatggagttgtcattggtttatgt
tgctgttctaagaccaagtcatcagcagtacagctggctgacggccaggtgctcaagtac
ctttgggagtcgccttcttcggctgtggagccctggaagaactctgaagggcgtcctgtc
cgatttgctcgtccatgcacacagatggaagcagccgccattggaggggaggaatgtgtc
cttggtctgaccgacaggtgtcgctttttcatcaacgacactgaggttgcatcaaatatc
acgtcatttgcagtgtgtgatgactttctactggtgacaacccattcccacacctgccag
tgtttctctctaagtggtgcctcacttaaaatgctgcaggcaggtctgtgtggcagtcag
gtgcccagtggagagattctgaggaaggtggagaggggttcccggatcgtcacagtcgtc
ccccaggacacaaagcttatactccagatgccgagggggaacttggaggttgttcatcat
cgggccttggtcttggctcagattcggaagtggctggacaaacttatgtttaaagaagcg
tttgaatgcatgaggaaactgagaattaacctcaatctgattcatgatcataaccccaag
gtgtttcttgaaaatgtggaaaccttcataaaacagattgattctgtaaatcatctaaac
ttgtttttcacagaactaaaggaagaagatgtcacaaagaccatgtaccctcccccggtt
accaagagtgtccaggtgtccacaaatcctgatggaaagaaagttgacctcatctgtgac
gctatgagagtggccatggagaccatcaatcctcgcaagttctgcctgtccatactcaca
tctcatgtgaagaagacgactccagaactggacattgtgctgcagaaggtacacgaactt
caaggaaaaattccctttgaacctgagagtgtgagtgcagaggaggctttgaaatacctg
ctgctcctggtagatgttaatgaattatttaatcattctcttgggacctatgactttgat
ttggtcctcatggtagctgagaagtcacaaaaggatcctaaggaatatcttccatttctt
aatacacttaagaaaatggaaactaattaccaacggttcaccatagacaagtacttgaaa
cgatatgaaaaggcccttggacacctcagcaagtgtggacctgagtatttcacagaatgc
ttaaatttgataaaagataaaaacttgtataaagaagctctgaagttatatcggccagac
tcaccacagtaccaggcggtcagtgttgcttatggcgagcacctggtgcaggagcacctg
tacgagccagcagggcttgtgtttgcccgctgtggggcccatgagaaggctctggaagcg
tttttggcttgtggcagctggcagcaagccctttgtatggctgcccagcttcagatggcc
aaagacaaggtggctggccttgctagaactctggcaggaaagctggtcgagcagaggaaa
cacagtgaggcagcaacagtcctggaacagtacgcccaggattatgaagaagccgtgctc
ttgctgctagaaggatctgcctgggaagaagctctgaggctggtatacaagtatgacaga
gtggatattatagaaaccagcgtaaagccttccattttagaagcccaaaaaaattacatg
gactttctggactctcagacagccacattcattcgccataaaaaccgcttgaaggtggtt
cgagagctcaagagccaagcaccacgggtgcatgtggatcacgaggtggcccatggccga
gagacggacctcttctcggaaaccagcagtattaggagtggcagcgagatgagtggcaga
tactcccacagtaactccaggatatctgcgaggtcatctaaaaaccgccgcaaggcagaa
cggaagaagcatagcctcaaagaagggagccccctggagggcctggcacttctggaggcg
ctgagtgaggtggtacagagcattgagaagctgaaagatgaagtgcacgctattttaaag
gtgctctttctctttgagttcgaagagcaagcaagggagttacagagggcctttgagagt
actctgcagctgatggggacggcacttccagacatctggactctcaccggccaacagagt
tcagccacacctgtcctaggtcccagttccactgtgaatagtatcatggcttcttaccag
cagcagaagacttgtgtccctgttctcgatgcttgggcttgtttgccaccgaagatcgac
cagagaagccagtggaagctgagcctgctggaatga
DBGET
integrated database retrieval system
