Rattus norvegicus (rat): 140941
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Entry
140941 CDS
T01003
Symbol
Siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04115
p53 signaling pathway
rno04120
Ubiquitin mediated proteolysis
rno04137
Mitophagy - animal
rno04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140941 (Siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140941 (Siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140941 (Siah1)
09143 Cell growth and death
04115 p53 signaling pathway
140941 (Siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
140941 (Siah1)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140941 (Siah1)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
140941 (Siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
140941
NCBI-ProteinID:
NP_543181
RGD:
620449
Ensembl:
ENSRNOG00000015143
UniProt:
Q920M9
A9UK92
LinkDB
All DBs
Position
19:36552165..36575773
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AA seq
282 aa
AA seq
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MSRQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcagactgctacagcattacccaccggcacctcaaagtgtccaccatcccag
agggtacctgccttgactggcacaactgcatccaacaatgacttggcgagtcttttcgag
tgtcctgtctgctttgactatgtattgccacctattcttcagtgtcagagtggccatctt
gtttgtagcaactgtcgccccaaacttacatgttgtcccacctgccggggcccgttggga
tccattcgcaacttggctatggagaaagtggccaactccgtactcttcccttgtaaatat
gcctcttctggatgtgagataactctgccgcacaccgaaaaggcagagcacgaggagctc
tgtgagttcaggccttactcctgcccctgccctggtgcttcctgtaagtggcaaggctcc
ttggatgctgtcatgccccacctgatgcatcagcacaagtccattaccaccctgcaagga
gaagatatagttttccttgctacagacattaaccttcctggtgctgttgactgggtgatg
atgcagtcttgttttggctttcatttcatgttagtcttggagaaacaagaaaaatacgat
ggccatcagcagttctttgcgattgtacagctgataggaacacgcaagcaagctgaaaat
tttgcatatcgacttgagctgaatggtcataggcggcgattgacttgggaagccacccct
cggtctattcatgagggaattgcaacagccatcatgaatagtgactgcctagtgtttgac
accagcattgcacagctctttgcagaaaatggcaatttaggcatcaatgtaactatttcc
atgtgttga
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