KEGG   Rattus norvegicus (rat): 155268
Entry
155268            CDS       T01003                                 
Symbol
Cldn16
Name
(RefSeq) claudin-16
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03272  Virion - Hepatitis viruses
rno04382  Cornified envelope formation
rno04514  Cell adhesion molecule (CAM) interaction
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    155268 (Cldn16)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    155268 (Cldn16)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    155268 (Cldn16)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    155268 (Cldn16)
  09158 Development and regeneration
   04382 Cornified envelope formation
    155268 (Cldn16)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    155268 (Cldn16)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    155268 (Cldn16)
   04147 Exosome [BR:rno04147]
    155268 (Cldn16)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   155268 (Cldn16)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   155268 (Cldn16)
  Exosomal proteins of colorectal cancer cells
   155268 (Cldn16)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like
Other DBs
NCBI-GeneID: 155268
NCBI-ProteinID: NP_571980
RGD: 620322
Ensembl: ENSRNOG00000055138
UniProt: A6JRY9 A0A0G2K8J2
LinkDB
Position
11:complement(87795106..87814396)
AA seq 235 aa
MKELLQYAACFLAIFSTGFLIVATWTDCWMVNADDSLEVSTKCRGLWWECVTNAFDGIRT
CDEYDSIYAEHPLKLVVTRALMITADILAGFGFITLLLGLDCVKFLPDEPHIKVRLCFVA
GTVLLIAGTPGIIGSVWYAVDVYVERSSLVLHNIFLGIQYKFGWSCWLGMAGSLGCFLAG
ALLTCCLYLFKDVGPERNYPYAMRKPYSTAGVSMAKSYKAPRTETAKMYAVDTRV
NT seq 708 nt   +upstreamnt  +downstreamnt
atgaaggagcttcttcagtacgctgcctgcttcttggccattttctcaactgggtttttg
atcgtggccacctggacggactgttggatggtgaacgctgatgactctctggaggtgagc
actaaatgcagaggtctctggtgggagtgcgtcacaaacgcttttgatggaattcgtacc
tgcgatgagtatgactccatatatgcagaacaccccttgaagctggtggtgactcgggca
ctgatgatcacagccgacattctagctggctttggattcatcaccctcctccttggactt
gactgcgtgaagttcctaccggatgagccacacattaaagtccgcctctgctttgttgca
gggaccgtattactcatcgcaggtaccccgggaatcattggttctgtgtggtatgctgtg
gatgtttacgtcgagcgctcctctctcgttttacacaatatatttctcgggatccaatat
aaattcggttggtcctgctggctcggaatggctgggtctttgggttgttttttggctgga
gctctcctcacctgctgtttgtacctcttcaaagatgttggacctgagaggaactaccct
tatgccatgaggaagccctattcaactgcaggtgtttccatggccaaatcctacaaggcc
cctaggacagagacagccaaaatgtacgctgtagacacgagagtgtaa

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