Rattus norvegicus (rat): 171009
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Entry
171009 CDS
T01003
Symbol
Actn3
Name
(RefSeq) alpha-actinin-3
KO
K21073
actinin alpha 2/3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04820
Cytoskeleton in muscle cells
rno05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
171009 (Actn3)
09160 Human Diseases
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
171009 (Actn3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
171009 (Actn3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
171009 (Actn3)
04147 Exosome [BR:
rno04147
]
171009 (Actn3)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
171009 (Actn3)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
171009 (Actn3)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
171009 (Actn3)
Exosomal proteins of colorectal cancer cells
171009 (Actn3)
Exosomal proteins of bladder cancer cells
171009 (Actn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_7
EF-hand_1
EF-hand_6
CAMSAP_CH
EF-hand_8
AIF-1
PRP9_N
Motif
Other DBs
NCBI-GeneID:
171009
NCBI-ProteinID:
NP_596915
RGD:
621792
Ensembl:
ENSRNOG00000019745
UniProt:
F7FM00
Q8R4I6
LinkDB
All DBs
Position
1:complement(211588473..211604401)
Genome browser
AA seq
900 aa
AA seq
DB search
MMMVMQPEGLGAGEGPFSGGGGGEYMEQEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRK
AGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIASKGVKL
VSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQ
NFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIGNLNTAFEVAEKYLDIPKMLDAEDI
VNTPKPDEKAIMTYVSCFYHAFAGAEQAETAANRICKVLAVNQENEKLMEEYEKLASELL
EWIRRTVPWLENRVGEPSMSAMQRKLEDFRDYRRLHKPPRVQEKCQLEINFNTLQTKLRL
SHRPAFMPSEGKLVSDIANAWRGLEQVEKGYEDWLLSEIRRLQRLQHLAEKFQQKASLHE
AWTRGKEEMLNQHDYESASLQEVRALLRRHEAFESDLAAHQDRVEHIAALAQELNELDYH
EAASVNSRCQAICDQWDNLGTLTQKRRDALERMEKLLETIDQLQLEFARRAAPFNNWLDG
AIEDLQDVWLVHSVEETQSLLTAHEQFKATLPEADRERGAILGIQGEIQKICQTYGLRPK
SGNPYITLSSQDINNKWDTVRKLVPSRDQTLQEELARQQVNERLRRQFAAQANAIGPWIQ
GKVEEVGRLAAGLAGSLEEQMAGLRQQEQNIINYKSNIDRLEGDHQLLQEGLVFDNKHTV
YSMEHIRVGWEQLLTSIARTINEVENQVLTRDAKGLSQEQLNEFRASFNHFDRKRNGMME
PDDFRACLISMGYDLGEVEFARIMTMVDPNAAGVVTFQAFIDFMTRETAETDTAEQVVAS
FKILAGDKNYITPEELRRELPAEQAEYCIRRMAPYKGSGAPSGALDYVAFSSALYGESDL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggttatgcagcccgagggtctgggggccggggaggggcccttctctggtggc
gggggcggtgagtacatggaacaggaggaagactgggaccgcgacttgctgttggatcct
gcctgggagaaacagcagcggaaaaccttcactgcatggtgcaactcccatctgcgcaag
gcaggcacacagatcgagaacattgaagaggacttccgcaatggcctgaagctcatgctg
ctcctggaggtcatttctggagagaggctgcccaggccagacaaaggcaagatgcgcttc
cacaaaatcgccaatgtcaacaaagccctggacttcattgccagcaaaggagttaagcta
gtgtccatcggtgctgaagaaattgttgacgggaacctgaagatgaccctgggcatgatc
tggaccatcatcctccgctttgccattcaggacatctctgtagaagagacctcagccaaa
gaaggcttgcttctctggtgtcagcggaaaacagcaccataccgcaatgtcaacgtacag
aacttccataccagctggaaggatggcctggccctctgtgctctcatccaccgccaccgg
ccagatctcattgactatgccaagcttcgcaaggatgaccccattggaaacctgaacact
gcctttgaggtggcagagaaatacctggacatccctaagatgctggatgcagaagatatt
gtgaacacccccaaaccagatgagaaagccatcatgacctatgtttcctgcttctaccat
gcatttgctggggctgagcaggcagagactgctgccaacaggatctgcaaggtcttagct
gtgaaccaggaaaacgagaagctgatggaggagtatgagaaactggctagtgagctgttg
gagtggatccgccgcactgtcccatggctagagaaccgagtgggtgaacccagcatgagt
gccatgcagcgcaagctggaggacttccgcgactacaggcgcctgcacaagcctccccgt
gtgcaggagaagtgccagctggagatcaacttcaacacgctgcagaccaagctgcgcctg
agccaccgacctgctttcatgccctcagagggcaagctggtttcggacatagccaatgcg
tggcggggactggagcaggtggagaagggctatgaggactggctgctttcagagatcagg
cgtctgcagaggcttcagcacctggctgagaagttccagcagaaggcttccctgcatgaa
gcttggacccggggcaaagaggaaatgttaaaccagcatgactacgagtcagcttcgctg
caggaggtgcgtgcgctcttgcgacgtcatgaggcctttgagagcgacttggctgcacat
caagaccgggtggaacacattgcagccctggcccaggaactcaatgagctggactaccat
gaggcagcctcggtgaatagccgctgccaagccatctgcgaccagtgggataacttgggt
acactgacccagaagaggagggatgcactagagagaatggagaagctcctggaaaccatt
gaccagctgcagctggagtttgctcggcgggcagcgcccttcaacaactggctggatggg
gctattgaggacctgcaggatgtgtggctagtgcactctgtagaagagacgcagagcctg
ctaacagcacatgaacagttcaaggcaacgttgcctgaggcggatcgagagcgaggtgcc
atcctgggcattcaaggagagattcagaagatctgtcagacgtatggactgcggccaaag
tctggcaacccctacatcaccctcagctcgcaggacatcaacaataagtgggacacggtc
agaaagctggtacccagccgtgaccagacactgcaggaggagctggcccggcagcaggtg
aatgagaggctccggcgacagtttgcagcccaggccaatgccataggaccctggatccag
ggaaaggtggaggaagtagggcggctggcagctgggctggctggctctctggaggagcag
atggcaggtctgcgacagcaggagcagaacatcatcaattacaagagcaacatcgaccgg
ctggagggtgaccaccagctgctgcaggagggcctagtctttgacaacaagcacacggtc
tacagcatggagcacatccgtgtgggctgggagcagctgctcacctccattgcccgcacc
atcaatgaggtggagaaccaggtactgacccgagatgccaagggcctgagccaggaacag
ctcaacgagttccgggcatctttcaaccactttgaccggaagcggaatgggatgatggaa
cctgatgatttccgagcttgcctcatctccatgggctatgatctgggagaggtggagttt
gctcggatcatgaccatggtggaccccaatgcagctggggtcgtgaccttccaagccttc
attgacttcatgacccgagagactgcagagacagacacagctgaacaagttgtagcctcc
ttcaaaatcctagcaggagacaagaactacattaccccagaagagctgcggagggagctc
ccagccgagcaggctgagtactgcatccgtcggatggcaccctacaaaggatcgggggct
ccgtccggggccctggactacgtggctttctctagtgccctctacggagagagtgacctc
tga
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