Rattus norvegicus (rat): 171073
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Entry
171073 CDS
T01003
Symbol
Hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
171073 (Hdgfl2)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
171073 (Hdgfl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
171073
NCBI-ProteinID:
NP_598232
RGD:
621013
Ensembl:
ENSRNOG00000049142
UniProt:
Q925G1
LinkDB
All DBs
Position
9:996687..1016352
Genome browser
AA seq
669 aa
AA seq
DB search
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPLPVSSSDSEAPEADLGGGSDADKEK
EARRVMTVTAVTTTATSGRTESDSDSDKNSDHSGLKRKTPVLKMSVSKRARKASSDLDQA
SVSPSEEDSESPSESEKTSDQDFTPEKKTIARAPRRAPLGGRKKKKVPSASDSDSRADSD
GAKEEPVVTAQPSPSSASSSSSSSASDSDVSIKKPPRGRKPAEKPPPKPRGRRSKPERPP
STSSSDSDSDSGEVDRISEWKRRDEERRRELEARRRREQEEELRRLREQEREEKERRKER
AERGGSSGEELEDEEPVKKRSRKARGRGTPSSSDSEPEGELGKEGKKLAKKSQLQGSESA
RKPGQKEKRGRPDEKPRARPVKVERTRKRSEGLSLDRKGEKKKEPSVEERLQKLHSEIKF
ALKVDNPDVRRCLSALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMAKAAEVYT
RLKSRVLGPKVEALQKVNKAGAEKERADGEKVEEQPGEQAPRELAEDEPSTDRSAPVNGE
AASQKGENTEDGAQEDGQDLEDGPRGGSSEELHDSPQDSSDPARPGNEHQDHERMQLASE
SADDDDEDS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccttcaagcccggggacttagtgtttgccaagatgaagggctacccgcac
tggccggcccggatcgatgacattgctgatggtgctgtgaagccgccacctaacaaatac
cccatcttcttctttggaacgcatgaaacggcctttttgggacccaaggacctgttccct
tatgacaagtgcaaggacaagtacggaaagcccaacaagaggaaaggcttcaatgagggg
ctctgggagatccagaacaacccccacgccagctacagtgcgcctctgcctgtgagctcc
tctgacagtgaggcccctgaagccgacctgggtggtggcagtgacgcagacaaggaaaaa
gaagcccggagggtcatgactgtgacagctgtgaccaccacagccaccagtggcaggacg
gagagcgactccgactctgacaagaacagtgatcacagtggcctgaagcggaagacgcca
gtcttgaagatgtcagtctctaaacgagctagaaaggcctccagcgacctggatcaggcc
agtgtttccccatcggaagaggactctgagagcccatctgagtcagagaagaccagtgac
caggattttaccccagagaagaagacaatagcccgggctccacggcgggctcctctggga
ggacgcaaaaagaagaaggtgccgtcagcctcagattcagactccagagccgactcagat
ggggccaaggaggagcctgtggttacagcacagccgtctccgtcgtcggcctcctcctca
tcctcctcatccgcctcagattcagatgtgtccatcaagaaaccccctcgaggcagaaag
ccagctgagaagccaccccccaaaccccgagggcggagatcaaagccagaacgaccacct
tccacctccagcagtgacagtgacagtgacagtggtgaggtggaccgaatcagtgaatgg
aagaggcgtgatgaggagcgaaggcgagagctagaggctcggaggcgacgggagcaggag
gaagagctccggaggcttcgagagcaggagagggaagagaaggagcggcgcaaggagcgg
gcagagcgtgggggcagcagtggggaggagctggaggacgaggagcctgtgaagaagcgt
agccgcaaggctcggggccggggcacaccatcctcctctgactcagagcccgaaggggag
cttgggaaagaggggaagaagttggccaagaagtcccaactgcaaggctcagagtctgca
aggaagcctgggcagaaggagaagagagggcggccagacgagaagccaagagccaggcct
gtgaaggtggaacggacacggaagcggtcagagggtctctcactggacaggaagggggaa
aagaagaaagaaccttccgtagaggagagactgcaaaagctacacagcgagatcaaattt
gcactgaaggttgacaacccagatgtgaggaggtgtctgagtgcactggaagaactggga
accctgcaggtaacctctcagatccttcagaagaacacagatgtggtagcaacgctcaag
aagattcgccggtacaaggccaacaaagatgtgatggcgaaggcagcagaggtctacacc
cggctcaagtcgagggtcctggggccgaaagttgaggctctccagaaggtgaacaaagct
ggagccgagaaggaacgggccgatggcgagaaggtggaggaacagcctggggagcaggct
cccagagagctggcggaggatgagcccagcactgatcggtcagcacctgtgaatggtgaa
gccgcatcccagaagggagagaacacagaagatggagcacaggaagacgggcaggacttg
gaggatggccccaggggtggctcctcagaagagctgcatgacagcccacaggacagctct
gaccccgccaggcctgggaatgagcatcaggaccatgagaggatgcagttggcctctgag
tctgccgatgatgatgatgaggacagctga
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