Rattus norvegicus (rat): 171093
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Entry
171093 CDS
T01003
Symbol
Shank2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform d
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
171093 (Shank2)
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SH3_2
PDZ_6
SH3_9
PDZ
SH3_1
SAM_4
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
171093
NCBI-ProteinID:
NP_597685
RGD:
628772
Ensembl:
ENSRNOG00000050206
Vega:
OTTRNOG00000002182
UniProt:
Q9QX74
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:208575144..209020300
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AA seq
1470 aa
AA seq
DB search
MKSLLNAFTKKEVPFREAPAYSNRRRRPPNTLAAPRVLLRSNSDNNLNAGAPEWAVCSAA
TSHRSLSPQLLQQTPSKPDGATKSLGSYAPGPRSRSPSLNRLGGAGEDGKRPQPPHWHVG
SPFTPGANKDSLSTFEYPGPRRKLYSAVPGRLFVAIKPYQPQVDGEIPLHRGDRVKVLSI
GEGGFWEGSARGHIGWFPAECVEEVQCKPRDSQAETRADRSKKLFRHYTVGSYDSFDAAS
DCIIEDKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAG
LRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNLDPDDTARKKAPPPPK
RAPTTALTLRSKSMTAELEELVDKASVRKKKDKPEEIVPASKPSRTAENVAIESRVATIK
QRPTSRCFPAASDVNSVYERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSIDSRIFLSG
ITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPRSPTPRVYG
TIKPAFNQNPVAKVPPATRSDTVATMMREKGMFYRRELDRFSLDSEDVYSRSPAPQAAFR
TKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCSIPIPTIIVKE
PSTSSSGKSSQGSSMEIDPQATEPGQLRPDDSLTVSSPFAAAIAGAVRDREKRLEARRNS
PAFLSTDLGDEDVGLGPPAPRMQPSKFPEEGGFGDEDETEQPLLPTPGAAPRELENHFLG
GGEAGAQGEAGGPLSSTSKAKGPESGPAAALKSSSPASPENYVHPLTGRLLDPSSPLALA
LSARDRAMQESQQGHKGEAPKADLNKPLYIDTKMRPSVESGFPPVTRQNTRGPLRRQETE
NKYETDLSKDRRADDKKNMLINIVDTAQQKSAGLLMVHTVDIPVAGPPLEEEEDREDGDT
KPDHSPSTVPEGVPKTEGALQISAAPEPAAAPGRTIVAAGSVEEAVILPFRIPPPPLASV
DLDEDFLFTEPLPPPLEFANSFDIPDDRAASVPALADLVKQKKSDTPQPPSLNSSQPANS
TDSKKPAGISNCLPSSFLPPPESFDAVTDSGIEEVDSRSSSDHHLETTSTISTVSSISTL
SSEGGESMDTCTVYADGQAFVVDKPPVPPKPKMKPIVHKSNALYQDTLPEEDTDGFVIPP
PAPPPPPGSAQAGVAKVIQPRTSKLWGDVTEVKSPILSGPKANVISELNSILQQMNRGKS
VKPGEGLELPVGAKSANLAPRSPEVMSTVSGTRSTTVTFTVRPGTSQPITLQSRPPDYES
RTSGPRRAPSPVVSPTELSKEILPTPPSAAAASPSPTLSDVFSLPSQSPAGDLFGLNPAG
RSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFMDNEIDGSHLPN
LQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttgttaaatgccttcaccaagaaggaagtgcccttccgagaggccccagct
tattccaaccgcaggcggcggccccccaacacattggctgcccccagagttcttctgcgt
tccaatagcgacaacaacctcaatgccggtgcgcctgaatgggctgtctgctctgcagcc
acctcccaccgaagcctctcaccccagctgctgcagcagacacccagcaaacctgatgga
gccacaaagagccttggaagctacgcccctgggccccgcagccgctctccctcactcaac
aggctgggtggcgctggtgaggacggcaagaggccacagccgccacattggcatgtgggg
tcgcccttcactcctggtgccaacaaggactccctctcgacctttgagtacccagggccc
cggaggaagctgtatagtgcggtgcctgggagactcttcgtcgccatcaagccataccaa
ccccaagtcgacggcgagatcccccttcaccgaggcgacagggtcaaagttctgagcatc
ggcgagggcggcttctgggaaggcagcgcccgtggccacatcgggtggttcccagctgag
tgtgtggaggaggtacaatgtaagccccgggacagccaagcagaaacccgtgcggaccgc
agcaagaagctctttcggcattacacagtgggctcctatgacagctttgatgctgccagt
gactgcattattgaggacaagacggtggtcctgcagaagaaagacaacgagggctttgga
tttgtgctccgaggggcaaaagctgatacccccattgaggaattcacacccacgccggca
tttccagccctgcagtacctggagtccgtggatgaaggaggggtggcatggcaagccgga
ctaaggaccggggacttcttgattgaggttaacaatgaaaatgtcgtcaaggtgggccac
aggcaggtggtgaacatgatccgccagggagggaatcacctcgtccttaaggtcgtcacg
gtgaccaggaatctagaccctgatgatacagccagaaagaaagctcccccacctccaaag
cgggctccgaccacggccctcaccctgcgttccaagtccatgacagcggaattggaggaa
ctcgtggataaagcctcagtccggaagaagaaggataaaccggaagagatagtcccagcc
tccaagccctccaggactgcagagaacgtggccatagaatccagggtggcaaccatcaag
cagcggcccacaagccggtgctttccagctgcctctgatgtgaactccgtgtacgagcgc
caagggattgctgtaatgacgcccacggtccctgggagcccgaaaggcccatttctgggc
ctccctcgaggtacgatgcgaaggcagaaatcgatagacagcagaatctttctatcaggg
ataacagaggaagagcggcagtttctggctcccccaatgctgaagttcacccgaagcttg
tccatgccagacacttctgaggacatcccccctccgccacagtctgtgcccccctctccc
cctccaccttcccccaccacatacaactgtcccaggtccccgactccaagagtctatggg
acaattaagcctgcgttcaaccagaaccccgtcgccaaggtgcccccagccaccaggtct
gacactgtggccaccatgatgcgggaaaaggggatgttctacaggagagagctggaccgc
ttttccctggactcagaagacgtctacagccgcagccccgccccacaggctgccttccgc
accaagcggggacagatgcctgagaacccgtactcggaggtgggaaagatagccagcaag
gccgtctatgtccctgccaagccagccaggcggaagggcatgctggtaaagcagtccaac
gtggaggacagccctgagaagacgtgctccatccccatcccaaccatcatagtcaaggaa
ccctccaccagcagcagcggcaagagcagccaggggagcagcatggagatcgacccccag
gccactgagcccggccagctgcggccagatgacagcctcaccgtcagcagccccttcgcg
gcagccatcgctggggccgtgcgtgaccgggagaagcgtctggaagccaggaggaattcc
ccggccttcctctccaccgacctgggagatgaggacgtgggtctggggcctcctgctccc
cggatgcagccctccaagtttcccgaggagggtgggtttggtgatgaggatgaaacggaa
cagccgctattgcctacccctggagcagcgcccagggagctggagaaccacttcctaggt
ggtggtgaggctggtgctcagggggaggctgggggacccctgagttccacatccaaagcc
aaggggcctgaaagtggcccagcagccgccctcaagagcagcagcccagccagccctgag
aattacgtgcacccactcacggggcggctgctcgaccccagctccccgctggccctggca
ctgtccgccagggaccgagccatgcaggagtcccagcaaggacacaagggggaggccccc
aaggccgaccttaacaagcctctctacatcgataccaaaatgcggcccagtgtggagtcc
ggctttccaccggtcaccagacagaacaccaggggtcccctgcgaaggcaggagacagag
aacaagtatgagacggacctgagcaaggaccggagggctgacgacaagaagaacatgctg
atcaacatcgtggacactgcccagcagaagtcagccggcctactgatggtgcacacagtg
gacattcccgtggcggggccacccctggaggaagaggaggacagagaggatggggataca
aagccagaccactcaccctccacagtgccagaaggcgttcccaaaaccgaaggtgcttta
cagatctccgctgccccggagcccgccgctgcgcccggcaggaccatcgtggcagcgggc
tccgtggaagaggcggtaattctgccattccgcatcccccctccccctctggcgtccgtg
gacttggatgaggactttcttttcacagaaccattgcctcctcccctggaattcgccaat
agttttgatatccccgacgaccgggcagcttcagttcccgctctggctgacctggtcaag
cagaagaaaagtgacacccctcagcccccttcgttgaactccagccaaccagccaactct
acagacagtaagaagccagccggcatctcaaactgtctgccctcctcattcctgccaccc
cccgaaagctttgacgcggtcaccgactcggggatcgaggaggtggacagccggagtagc
agcgaccaccacctggagacaaccagcaccatctccacagtgtccagcatctccacgctg
tcttcagagggcggggagagcatggatacttgcacagtctatgcagacgggcaagccttt
gtggttgacaagcccccagtacctccaaagccaaaaatgaagcccatcgttcacaaaagc
aacgcactttaccaagacacgctcccagaagaggacacagatggctttgtgatcccccca
cctgcacccccgcccccgcccggcagtgcccaggccggtgtggcgaaggtcatccagcca
aggacctccaagttgtggggtgatgttacagaggtcaaaagcccaattctctcaggccca
aaggcaaatgtcattagtgagttaaactccattctgcagcagatgaacagggggaaatcg
gtcaagcctggggaagggctggagctgcccgtgggagccaagtcagctaacctcgctcca
agaagcccggaggtcatgagcactgtctcaggtacacggagcacgacggtcaccttcact
gtccgccccggaacctcccagcccatcaccctacagagccggccccctgactatgaaagc
aggacctcaggaccgagacgtgccccaagccctgtggtttcgccaacggaattgagcaaa
gagattctgcccacccctccgtctgctgcagcagcctctccctcccccacactctcagat
gtctttagccttccaagccagtcccctgcaggggacctctttggcttgaacccagcagga
cgcagcaggtcaccatctccttcaatattgcaacagccaatctcaaataagccttttaca
actaagcctgtccacctgtggacgaaaccagatgtggcagactggctggaaagtctgaac
ttgggtgaacacaaggagacgttcatggacaatgagattgacggcagccatctgccaaac
ctccagaaggaagacttgatagatcttggggtgactcgagttgggcacaggatgaacata
gaaagggctttgaaacagctgctggacagataa
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integrated database retrieval system
