Rattus norvegicus (rat): 171119
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Entry
171119 CDS
T01003
Symbol
Dscam
Name
(RefSeq) cell adhesion molecule DSCAM precursor
KO
K06767
Down syndrome cell adhesion molecule
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
171119 (Dscam)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
DSCAM family
171119 (Dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
171119
NCBI-ProteinID:
NP_598271
RGD:
619992
Ensembl:
ENSRNOG00000027992
UniProt:
Q8VHZ8
LinkDB
All DBs
Position
11:complement(49391385..49976861)
Genome browser
AA seq
2013 aa
AA seq
DB search
MWILALSLFQSFANVFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGA
LYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYG
TAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNV
RITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
ANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWM
KDSNGTPSLVTIDGRRSIFSNGSFVIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
ANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKILVTISCILVGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVVNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSR
DLSLGQACLEPQKSRTLKRPTVLEPTPMEASSSTSSTREGQQSWQQGAVATLPQREGAEL
GQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggctctctccttgttccagagcttcgcgaatgttttcagtgaagagccc
cactccagcctctactttgtcaatgcatcgctgcaagaggtagtgtttgcaagcacgtcg
gggaccctggtgccctgcccggctgcaggcatccctcctgtgactctcagatggtaccta
gcaacgggcgaggagatctacgatgtccctgggatccgccacgtccatcccaatggcact
ctccaaattttcccctttcctccttcaagcttcagcaccttaatccatgataatacttac
tattgcacagctgaaaacccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtc
gcggtgttcaagtgcattatcccctcctcggtggaggcgtacgtcactgtcgtctcatgg
gagaaagacacggtttcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattaaagatgtacagaacgaagatgggctgtacaactaccgctgcatcacgcgg
cacagatacacaggggagacgagacaaagcaacagcgcgagactgttcgtgtcagaccca
gcgaactcagccccatccatcctggacgggtttgaccaccgcaaagccatggcagggcag
cgtgtggagctgccgtgcaaagctcttgggcaccccgagccggactaccgctggctgaaa
gataacatgcccctggaactttccggaaggttccaaaagacagtgaccgggctgctcatt
gagaacagccgcccttcagactcaggcagctacgtgtgtgaagtatccaaccgatacggc
actgccaaggtgataggccgcctgtacgtgaaacagccactgaaagccaccatcagtccc
agaaaggttaaaagcagtgtgggcagccaggtctccttgtcctgcagtgtgacaggaaac
gaagaccaggagctctcctggtacagaaatggtgaaatcctcaaccctgggaaaaacgtg
aggatcacaggactcaaccacgcgaaccttataatggatcacatggtcaagagtgatggg
ggcgcctaccagtgctttgttcgcaaggacaagctatctgctcaagactatgtccaggtg
gtccttgaagacggaactcccaaaatcatttccgcctttagcgagaaagtggtgagcccg
gcagagccagtgtccctcgtgtgtaatgtgaagggtacacccttgcccacggtcacctgg
accctggacgatgaccccatcctcaagggcagcggccaccgcatcagccaaatgatcacg
tccgaggggaacgtggtcagctacctgaatatctccagctcccaggtccgggatgggggt
gtctaccgctgcactgccaacaactcggctggagtcgtcctgtaccaggctcgaataaac
gtaagagggccggcaagcatcagaccgatgaaaaacatcactgcgatagcagggcgtgac
acgtacatccactgccgtgtgattggctacccttattactccatcaagtggtacaagaac
gctaacctgcttcctttcaaccaccgccaggtggcgtttgagaacaatgggactctgaaa
ctctcagatgtgcagaaagaagttgacgagggagagtacacatgtaacgtgctggtgcag
ccacagctctccaccagccagagtgtccacgtgacagtcaaagttcctccttttatccaa
ccctttgagttcccaagattctctatcggtcagcgggtcttcatcccatgtgtggtggtc
tcgggggacttacccatcaccatcacctggcagaaggatggccggccgattccagcaagc
ctcggtgtaaccatcgacaacatcgacttcaccagctccctgaggatctccaacctctca
ctgatgcacaacgggaattacacctgcatcgcgcggaacgaggcggccgccgtggaacac
cagagccagctgattgtaagagttccccctaagttcgtggtccagccccgggaccaggat
gggatctatggcaaagcagtgattctcaattgctctgcagagggttatcctgtgcctaca
attgtgtggaaattctcaaaaggtgctggggtcccccagttccagccaattgccctgaat
ggcagaatccaggtcctgagtaatggctcactcttgatcaagcatgttgtggaagaagac
agtggctactacctctgcaaggtcagcaacgatgtgggcgcagacgtcagcaagtccatg
tacctcacggtgaaaattcctgccatgataacctcttatcccaacaccaccctggccact
cagggtcaaaggaaggagatgagctgcacagcacacggggagaagcccatcattgtccgc
tgggagaaagaggacaggatcattaaccctgaaatggcccgttacctggtgtccaccaag
gaggtgggagaggaagtgatttctactctgcagattttgccaacagtgagagaagattcc
ggcttcttctcctgccatgctatcaattcatatggggaggaccgcggaataattcagctc
acggtgcaagaacccccagacccccccgagattgagatcaaagatgtcaaagcccgcaca
atcacgctcaggtggaccatggggtttgatggcaacagccccatcacaggctacgacatt
gagtgcaaaaataaatcagactcctgggattctgctcaaagaaccaaagatgtttcccct
cagctgaactcggccaccatcattgatatccacccttcctccacctacagcatccgcatg
tacgccaagaaccggattggcaagagtgagcccagcaacgagatcaccatcacggcagat
gaggcagctcctgatggtccacctcaggaagtgcacctggaacccacctcatctcagagt
atcagggttacctggaaggctcccaagaaacatttacaaaatgggatcatacgtggctac
cagataggctaccgggagtacagcaccgggggcaacttccagttcaacatcatcagtatc
gacaccaccggggacagcgaagtgtacaccctggacaacctgaataagttcacccagtat
ggcctagtagtacaggcctgcaaccgggccggcacgggaccttcttctcaggagataatc
actaccaccctggaggacgtacccagctaccctcccgaaaatgtccaagccatagcaacc
tcaccagaaagcatatcaatctcctggtccacgctgtccaaggaggccttgaatgggatt
ctccaggggttcagggtcatctactgggccaacctcatagacggagagctgggcgagatt
aagaacgtcaccaccacgcagccttccttggagttggatggactagagaaatacaccaac
tacagtatccaggtgctggccttcacccgtgcaggggacggcgtccggagtgagcagatc
tttacccgtaccaaggaggatgttccaggtcctcctgctggtgtcaaggcagcagcagcc
tcggcctccatggtctttgtgtcctggctgcccccgctcaagctgaatggcatcattcgg
aagtacacggtgttctgctcccacccctaccccacagtcatcagcgagtttgaagcctcc
cctgactcattttcctacagaattcctaacctgagtcggaatcgacagtatagcgtctgg
gtggtggcagtgacttccgccggaagaggcaacagcagtgagatcatcaccgtggagcct
ctggctaaagctcctgcacggatcctcacgttcagtgggacagtgactactccgtggatg
aaggacatcgtcttgccgtgtaaagctgttggagacccatcacctgccgtaaaatggatg
aaggatagtaacgggacgcccagcctggtgacgattgatggccgcagaagcatcttcagc
aatgggagtttcgttattcgcacggtgaaggccgaggactctggctactacagctgtgtt
gccaataacaactggggatcagatgagatcatattaaatttgcaagtacaagttccacca
gatcagcctcggctcaccgtatccaagacgacatcctcctccatcaccctttcctggctt
cctggagacaatgggggcagctccatcagaggctacatcctgcaatattccgaggacaac
agtgagcagtgggggagctttcccatcagccccagcgagcgttcctaccgcttggaaaac
ctaaagtgtgggacatggtataagttcacccttactgcccaaaatggagtgggacccgga
cgcataagtgaaatcatagaagccaaaactctggggaaagaaccccagttctccaaggag
caggagctcttcgccagcatcaataccacccgagtgaggctgaatctgattggctggaac
gacggcggctgtccaatcacctcattcactcttgagtacagacccttcgggaccacggtc
tggaccacagctcagcggacctccctttccaagtcttacattctgtatgacctccaagaa
gccacatggtatgaactgcagatgcgagtgtgcaacagcgccggctgcgcagagaagcaa
gccaactttgccacgctgaactacgatggcagtacaatccctccactcattaagtcagtt
gtccaaagcgaagaagggctgacaaccaacgaagggctcaagatcctcgtgaccatctcc
tgcatcctggtcggggttctgctgctctttgtgcttctgctggtggtgcgaaggagacgg
agggagcagaggctgaagaggctgagagatgcaaagagtttagctgagatgctcatgagc
aagaacacacggacttcagataccttgagcaaacagcaacagactctgaggatgcacatt
gatatacccagggctcagcttttgattgaagagagagacacaatggagaccatagatgac
cgctccacagtcctgttaacggatgctgactttggggaggcagccaaacagaagtcactg
acggtgactcacacggtgcattaccaatcggtgtctcaggccaccgggcccctagtggat
gtctccgatgctcggccaggaacgaatcccaccaccaggaggaatgcaaaggctggaccc
acagcaagaaaccggtacgccagccagtggaccctcaacagaccccaccccaccatctca
gcacacactctcaccacagactggagactgcctacccccagggctacaggctccgtggac
aaggaaagtgacagctacagcgtcagcccatcacaagacacagacagagcaaggagcagc
atggtctccacagaaagtgcctcctctacctacgaagaactggccagggcctacgagcac
gccaagatggaggagcagctgaggcacgccaagttcaccatcacagagtgcttcatatcc
gacacgtcctccgagcagctgacggcagggacaaacgagtacacggacagtctgacctcc
agtaccccttcagaatcggggatctgcagattcactgcgtctccccccaaacctcaggat
ggaggtcgtgtggtgaacatggcggttccaaaggcccatcggccaggcgacctcatacac
ctgcctccatacctgcgaatggacttcttgttaaaccggggcgcaccaggcaccagcagg
gacctgagcttaggacaagcgtgcttggaaccccagaaaagtcggaccctgaagcgcccc
acggtccttgagcccacccctatggaggcttcctcctccacctcttccacgagagaagga
cagcagtcgtggcaacaaggggccgtggccaccttacctcagcgagagggtgcagagctg
ggacaggcagctaaaatgagcagctcccaagagtcgctgctggactctcggggccacttg
aaaggaaacaatccctacgcaaaatcctacaccttggtataa
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integrated database retrieval system
