Rattus norvegicus (rat): 171148
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Entry
171148 CDS
T01003
Symbol
Slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04082
Neuroactive ligand signaling
rno04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
171148 (Slc6a5)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
171148 (Slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
171148 (Slc6a5)
Transporters [BR:
rno02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
171148 (Slc6a5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
DUF999
Motif
Other DBs
NCBI-GeneID:
171148
NCBI-ProteinID:
NP_976079
RGD:
621824
Ensembl:
ENSRNOG00000031662
UniProt:
P58295
LinkDB
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Position
1:108767245..108833173
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AA seq
799 aa
AA seq
DB search
MDCSAPKEMNKPPTNILEATVPGHRDSPRAPRTSPEQDLPAAAPAAAVQPPRVPRSASTG
AQTFQSADARACEAQRPGVGFCKLSSPQAQATSAALRDLSEGHSAQANPPSGAAGAGNAL
HCKIPALRGPEEDENVSVAKGTLEHNNTPPVGWVNMSQSTVVLGTDGIASVLPGSVATTT
IPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLA
LAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYL
FASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTMVN
FTSQANKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLPFCLFLAWVIVYASLAKGIKTS
GKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSL
SAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKVNIENV
ADQGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYL
RTHKPVFTLGCCICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGL
QRFCEDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLG
WLMLACSVIWIPIMFVIKMYLAPGRFIERLKLVCSPQPDWGPFLAQHRGERYKNMIDPLG
TSSLGLKLPVKDLELGTQC
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggattgcagtgctcccaaggaaatgaataaaccaccaaccaacatcttggaggcaacg
gtgccgggccaccgggatagccctcgagcacctaggaccagccctgagcaggatcttcct
gcggcagcccccgcggccgctgtccagccgccacgtgtgcccaggtcggcttccaccggc
gcccaaactttccagtctgcggatgcgagagcctgtgaggcacagcggcctggagtaggg
ttttgtaaacttagcagcccccaggcacaagcgacctctgcggccctccgggacttaagc
gaagggcacagcgcacaggccaatcccccttccggggccgctggggctggcaacgcttta
cactgcaagattccagctctgcgtggcccggaggaggacgagaacgtgagtgtggccaag
ggcacgctggagcacaacaataccccacccgtgggctgggtgaatatgagccagagcaca
gtggtgttgggtaccgatggaatcgcgtcggtgctcccgggcagcgtggccaccactacc
attccggaggacgagcaaggggatgagaataaggccagagggaactggtccagcaaactg
gacttcatcctgtccatggtggggtacgcagtggggctgggtaatgtttggaggtttccc
tacctggccttccagaacgggggaggtgctttcctcatcccttacttgatgatgctggca
ctggctggcttacctatcttcttcctagaggtgtccctgggccagtttgccagccagggt
cctgtgtctgtgtggaaggccatcccagctctgcagggctgtggcattgcgatgctcatc
atctccgtcctcatagccatctactacaacgtcatcatctgctacacgctcttctacctg
tttgcttcttttgtgtctgtgctgccctggggatcctgcaacaacccgtggaacacacca
gaatgcaaagacaaaaccaaacttttactagattcctgtgttatcggtgaccatcccaag
atacagatcaagaactctactttctgcatgactgcctatccgaacttgaccatggttaac
ttcaccagccaggccaataagacatttgtcagcgggagtgaagagtacttcaagtacttt
gtgctgaagatttctgcagggattgaatatcctggtgagatcaggtggcccttgccgttc
tgccttttcctggcctgggtgattgtatatgcatcgctggcaaaaggaattaagacatca
ggaaaagtggtgtacttcacagccaccttcccttatgtcgtcctggtcatcctcctcatt
cgaggggtcaccctgcctggagctggagccggtatctggtacttcatcacacctaagtgg
gagaaactcacggatgccacggtgtggaaggatgcagccactcagattttcttctccctg
tctgcggcctggggagggctcatcactctttcttcttacaacaaattccataacaactgc
tacagggacacgttaattgtaacctgcaccaacagtgccactagcatcttcgctgggttt
gtcatcttctctgtcattggcttcatggccaacgagcgcaaagtcaacattgagaatgtg
gctgaccaagggccaggcattgcatttgtggtttacccagaagccttaaccaggctgcct
ctctctccattctgggccatcatctttttcctgatgcttctcacgcttggacttgacacc
atgtttgctaccatcgagaccattgtgacctccatctcggatgagtttcccaagtatctg
cgcacacacaagcctgtgttcaccctgggctgctgcatctgcttcttcattatgggcttc
ccaatgatcacacagggtggaatctacatgtttcagcttgtggacacctatgctgcctcc
tatgctcttgtcatcattgccatatttgagcttgttggcatctcctatgtgtacggcttg
cagaggttctgtgaagacatcgagatgatgattggattccagcccaacattttctggaag
gtctgctgggcgtttgtcacaccgaccattttaacgtttatcctttgcttcagcttctat
cagtgggagcccatgacctatggctcctaccgctaccctaactggtccatggtgcttgga
tggctgatgctcgcctgctccgtgatctggatcccgattatgttcgtgataaaaatgtat
ctggctcctgggagatttattgagaggctgaagttggtatgctcgccacagccggactgg
ggcccattcttagctcagcaccgcggggaacgctacaagaatatgatcgaccccttggga
acctcgtccctgggactcaagctgccagtgaaggatttggaactgggcacccagtgctag
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