Rattus norvegicus (rat): 171163
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Entry
171163 CDS
T01003
Symbol
Slc6a13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04082
Neuroactive ligand signaling
rno04721
Synaptic vesicle cycle
rno04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
171163 (Slc6a13)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
171163 (Slc6a13)
04721 Synaptic vesicle cycle
171163 (Slc6a13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
171163 (Slc6a13)
Transporters [BR:
rno02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
171163 (Slc6a13)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
171163
NCBI-ProteinID:
NP_598307
RGD:
620788
Ensembl:
ENSRNOG00000012876
UniProt:
P31646
A6ILC5
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Position
4:156211381..156248491
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AA seq
602 aa
AA seq
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MDNRVSGTTSNGETKPVCPVMEKVEEDGTLEREQWTNKMEFVLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRKICPIFEGIGYASQM
IVSLLNVYYIVVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKTNNSLNVTSENAT
SPVIEFWERRVLKISDGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDCVALCILNSSTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPRVFRKKNRREILI
LIVSVVSFFIGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGASRFYDNI
EDMIGYKPWPLIKYCWLFFTPAVCLATFLFSLIKYTPLTYNKKYTYPWWGDALGWLLALS
SMVCIPAWSIYKLRTLKGPLRERLRQLVCPAEDLPQKSQPELTSPATPMTSLLRLTELES
NC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggataacagggtctcgggaacgaccagtaatggagagacaaagccagtgtgtccagtc
atggagaaggtggaggaagacggtaccttggaacgggagcaatggaccaacaagatggag
ttcgtactgtcagtggcgggagagatcattggcttaggcaacgtctggaggtttccctat
ctctgctacaagaacgggggaggtgccttctttattccctacctcatcttcctatttacc
tgtggcattcctgtcttcttcctggagacagcgcttggccagtacaccaaccagggaggc
atcacagcctggaggaaaatctgtcccatcttcgagggcatcggctatgcctcacagatg
atcgtcagccttctcaatgtctactacatcgttgtcctggcctgggccctcttctacctc
ttcagcagcttcaccactgacctcccctggggtagctgcagccacgagtggaatacagaa
aactgtgtggagttccagaaaaccaacaattccctgaatgtgacttctgagaatgccaca
tcccctgtcatcgagttctgggagaggcgagtcctgaagatctcagatggcatccagcac
ctggggtccctgcgctgggagctggtcctgtgcctcctgcttgcctggatcatctgctat
ttctgcatctggaaaggggtcaagtccacaggcaaggtggtgtacttcacagctactttc
ccttacctcatgctggtggtcctgttgatccgaggagtaacactgcctggagcagcccag
ggaattcagttttacctgtaccccaacatcacacgtctgtgggatccccaggtgtggatg
gatgcgggcacccagatcttcttctcctttgccatctgcctggggtgcctcacggccctg
ggcagctacaacaagtaccacaacaactgctacagggactgcgtcgccctttgcattctc
aacagcagcaccagcttcgtggccgggtttgccatcttctccatcctgggcttcatgtct
caggagcagggcgtacccatatctgaggttgctgaatcaggccctggcctggcattcatc
gcctaccctcgagctgtggtgatgttacctttctcgcctttgtgggcctgctgtttcttc
ttcatggtggttctcctgggactagacagccagtttgtgtgtgtagaaagcctcgtgaca
gcgctggtggacatgtatccccgggtgttccgtaagaagaaccggagggagattctcatc
ctcatcgtgtctgtcgtctctttcttcatcgggctcattatgctcacagagggcggcatg
tacgtgttccagctcttcgactactatgcggccagtggcatgtgtcttctctttgtggcc
atctttgagtccctctgtgtggcttgggtttacggagccagccgcttctatgacaacatt
gaagatatgattgggtacaagccgtggcctcttatcaaatactgttggctctttttcacg
ccagctgtgtgcctggcaaccttcctgttctccctgatcaaatacacgccactgacctac
aacaagaagtacacatatccatggtggggggatgccctggggtggctcctagctctgtcc
tccatggtctgcattcctgcctggagcatctacaagctcaggactctcaagggcccactc
agagagagacttcgccagctcgtgtgcccggctgaagaccttccccagaagagccaacca
gagctgacttctccagcgacaccgatgacgtccctcctcaggctcacagaactggagtct
aactgctag
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