Rattus norvegicus (rat): 171390
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Entry
171390 CDS
T01003
Symbol
Nlrp6
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 6
KO
K20863
NACHT, LRR and PYD domains-containing protein 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
171390 (Nlrp6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
171390 (Nlrp6)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
171390 (Nlrp6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
NOD2_WH
AAA_16
nSTAND3
Ribosomal_60s
DUF3764
Motif
Other DBs
NCBI-GeneID:
171390
NCBI-ProteinID:
NP_599202
RGD:
708549
Ensembl:
ENSRNOG00000045677
UniProt:
Q63035
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All DBs
Position
1:205434484..205441245
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AA seq
881 aa
AA seq
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MDAAGASCSSSEAVARELLLAALQDLSQEQLKRFRHKLRDAPLDGRSIPWGRLEHSDAVD
LTDKLIEFYAPEPAVDVTRKILKKADIRDVSLRLKEQQLQRLGSSSALLTVSEYKKKYRE
HVLRQHAKVKERNARSVKINKRFTKLLIAPGSGAGEDELLGTSGEPEPERARRSDTHTFN
RLFRGNDDEGPRPLTVVLQGPAGIGKTMAAKKILYDWAGGKLYHSQVDFAFFMPCGELLE
RPGTRSLADLILEQCPDRTAPVRRILAQPHRLLFILDGADELPTLAAPEATPCRDPFEAT
SGLRVLSGLLSQELLPSARLLVTSRNATLGRLQGRLCSPQCAEVRGFSDKDKKKYFFKFF
RDERKAERAYRFVKENETLYALCFVPFVCWIVCTVLLQQMELGRDLSRTSKTTTSVYLLF
ITSMLKSAGTNGPRVQGELRMLCRLAREGILKHQAQFSEKDLERLKLQGSQVQTMFLSKK
ELPGVLETVVTYQFIDQSFQEFLAALSYLLDAEGAPGNSAGSVQMLLNSDAGLRGHLALT
TRFLFGLLSTERIRDIGNHFGCVVPGRVKQDTLRWVQGQSQPKVATVGAEKKDELKDEEA
EEEEEEEEEEEEELNFGLELLYCLYETQEDDFVRQALSSLPEMVLERVRLTRMDLEVLSY
CVQCCPDGQALRLVSCGLVAAKEKKKKKKSFMNRLKGSQSTGKQPPASLLRPLCEAMITQ
QCGLSILTLSHCKLPDAVCRDLSEALKVAPSLRELGLLQNRLTEAGLRLLSQGLAWPKCK
VQTLRIQMPGLQEVIHYLVIVLQQSPVLTTLDLSGCQLPGTVVEPLCSALKHPKCGLKTL
SLTSVELTENPLRELQAVKTLKPDLAIIHSKLGTHPQPLKG
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgctggagcctcctgctccagctcggaggcggtggcaagggaactgcttctg
gccgcactgcaggatctgagccaggagcagctgaagcgttttcgccacaagctccgggat
gcgcccctggatggccgcagcatcccgtgggggcgactggagcactcagacgctgtggac
ctcacagacaagctgattgagttctatgcgccagagccagccgtagatgtgacccgaaag
atcctgaagaaggcggatattcgagatgtgtcgttgcgactcaaggagcagcagctgcag
aggctcggctccagctcggcgcttctcaccgtgtcggagtacaagaagaagtaccgcgag
cacgtgctacgacagcatgctaaggtgaaggagaggaatgcccgctccgtgaagatcaac
aagcgcttcaccaagctgctcattgcgccggggagcggcgccggggaggacgagctgctg
ggaacgtcgggggagcccgagcccgagcgcgcaaggcgctcggacacacacactttcaat
cggctcttccgaggaaatgatgacgagggcccgcggccgctgaccgtggtgctgcagggc
ccggcaggcatcggcaaaaccatggccgccaagaaaatcctctacgactgggcaggaggc
aagctataccacagccaagtggactttgccttcttcatgccgtgcggcgagctgctggag
cggccaggtacgcgcagcttggcggacctgatactggaacagtgcccggaccgcaccgcg
ccggtgcggcggatactagcgcaaccgcatcgtctactgttcatcctggacggtgcagac
gaattgcctactttagcagccccagaagccactccctgcagagaccctttcgaggctacg
agtggcttgagagtgctgagcgggctgctgagccaggagctgttaccatcggctcgcttg
ctggtgacttcacgcaacgccaccctcgggaggctgcagggcagactttgctcaccacag
tgcgcagaagtgcgcggcttctcagacaaagacaagaaaaagtatttcttcaagtttttc
cgggacgagaggaaggcagagcgcgcttaccgcttcgtgaaagagaatgagacgctgtac
gcactgtgctttgtgccgtttgtgtgctggatcgtgtgcaccgtgctgctgcagcaaatg
gagctgggccgggatctgtctcgtacctccaagaccactacatctgtgtacctgctcttc
atcaccagcatgctgaagtctgcaggtaccaatggaccccgggttcagggagagctgcga
atgctgtgccgcctggcccgggagggcatcctgaagcatcaagcacagttctcagaaaag
gacctggagagattgaagcttcagggttcccaagttcagacaatgtttctcagcaagaag
gagctgccaggagtgctagaaactgtggtcacctaccagttcattgaccagagcttccag
gagttcttggctgcattgtcatacctactagacgctgagggagccccagggaactccgca
ggaagtgtgcagatgctcctgaactctgacgcggggctgcgtggtcatctggcactcacc
actagattcctctttggactgctaagtacagagaggattcgtgacattggaaaccatttt
ggctgtgtggtgccagggcgtgtgaaacaggacaccttgcggtgggtacaaggacaaagc
caacccaaggtggcgacagtaggagcagaaaagaaggatgagctgaaggacgaggaagca
gaggaggaggaggaggaggaggaagaagaggaggaggaactcaactttggactggagctg
ttgtactgcctgtatgagacacaagaggatgattttgttcgccaggctctcagcagcctt
ccagagatggtactggagcgagttaggctgacccgcatggaccttgaggttctgagctac
tgcgtgcagtgctgcccggacggccaggctctgagactggtgagctgtggactggtggcg
gcaaaggagaagaagaagaagaagaagagcttcatgaaccggctgaagggttctcaaagc
accgggaaacaacccccagcctccttgctgcgtccactctgtgaggcaatgattacccag
caatgtggtctgagtattctgaccttgtcacactgcaaactccctgatgcagtttgtcga
gacctttctgaggctctgaaggtagctccttccctaagggagctgggcctcctccagaac
cgactcactgaggcaggcctgcgtttactaagccaaggcctggcttggcccaaatgcaag
gtgcagacactcaggatacagatgcctggcctccaagaggtgatccactacctggtcatt
gtgctccagcagagcccagtcctaaccactctggacctcagtggctgtcagctgcctggc
actgtggtggaacctctgtgttcagccctgaagcaccctaaatgtggcctaaagaccctc
agtctgacttctgtggagctgactgagaatccactgagagagcttcaagctgtgaagaca
ttaaagccagatctggccatcatacattcaaaattgggcacacatcctcagcctctgaag
ggatga
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