Rattus norvegicus (rat): 171393
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Entry
171393 CDS
T01003
Symbol
Clstn3
Name
(RefSeq) calsyntenin-3 precursor
KO
K22661
calsyntenin 3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
171393 (Clstn3)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Cadherin related
171393 (Clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
171393
NCBI-ProteinID:
NP_599203
RGD:
621153
Ensembl:
ENSRNOG00000011156
UniProt:
Q8R553
LinkDB
All DBs
Position
4:complement(159017795..159051069)
Genome browser
AA seq
957 aa
AA seq
DB search
MTLLLVSLLLASLLQISSGNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLR
YAGEICGFRLHGSGVPFKAVILDKATGEGLIRAKEPVDCEAQKEHTFTTQAYDCVDGPDG
ANTKKSHKATVHVRVNDVNEFAPVFVERLYRAAVTEGKLYDRILRVEAIDGDCSPQYSQI
CYYEILTPNTPFLIDNDGNIENTEKLQYSGEKLYKFTVTAYDCGKKRAADDAEVEIQVKP
TCKPSWQGWNKRIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTSHVAKGCDRDNY
SERALRKLCGAATGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPLGGPA
GLGSGPQDGLSDHFTLSFWMKHSVTPSKGKKEEETIVCNTIQNEDGYSHYSLTVHGCRIA
FLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYTDGISFDPALIHDNGLIH
PPRREPALMIGACWSEEKNKEKEKGGENSTDTTSGDPLPIHHYFHGYLAGFSVRSGRLES
REVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNHALQHVAYMNTL
RFATPGVRPLRLTTAVKCFSEESCVSIPEVEGYVVVLQPDAPQILLSGTAHFARPAVDFE
GPEGVPLFPDLQITCSISHQVEAKADESWQGTVTDTRMSDEIVHNLDGCEISLVGDDLDP
ERESLLLDMASLQQRGLELTNRSAYLTIAGVETITVYEEILRQARYQLRHGAALYARKFR
LSCSEMNGRYSSNEFIVEVNVLHSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSH
RNSMVPSAATLIIVVCVGFLVLMVILGLVRIHSLHRRVSGTGGPSGASADPKDPDLFWDD
SALTIIVNPMESYQNQQTGVAGVAGGQQEEEDSSDSEAADSPSSDERRIIESPPHRY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcctgctggtgtccctcttgctggcctctctgcttcagatcagctctggcaac
aaagcgaacaagcataagccatggatcgaggccgagtaccagggcatcgtcatggagaat
gacaacacggtcctgttgaatccgccactctttgccttggacaaagatgctccgctgcgc
tatgcaggtgagatctgtggcttccggctccatgggtctggggtaccctttaaggctgtg
atcctggacaaggcaacaggtgaagggctgatccgggccaaggagcctgtggactgcgag
gcccagaaggagcacacctttaccacccaggcttatgactgtgtagatgggcccgatggt
gccaataccaagaagtctcacaaggcgaccgtgcatgttcgggtcaacgatgtgaatgag
tttgccccagtctttgtggagcgtctctaccgtgctgcagtgactgaggggaagctgtat
gatcgcatcttacgtgtggaagccattgatggtgactgctcccctcagtacagccagatc
tgctactatgagatccttacacccaacacccctttcctcattgacaatgatggcaacatt
gagaacacagagaagttacagtacagtggtgagaagctctataagttcacagtgacagca
tatgactgtgggaagaagcgagcagcagatgatgctgaggtggaaatccaggtgaagccc
acctgcaaacccagctggcaaggctggaacaaaaggattgaatatgccccaggagcgggg
agcttggctttgttccctggcatccgcctggagacctgtgatgagccactgtggaacatt
caggccaccatagagctgcagaccagccatgtggccaagggctgtgaccgagacaactac
tcagagagggctctgcggaagctctgtggtgctgctactggggaggtggacctgttgccc
atgcctggccccaatgccaactggacagcggggctctcggtacactacagccaggacagc
agcctcatctactggttcaatggcacacaagctgtgcaagttcccctgggtggtccagca
gggctgggctctgggccgcaggatggcctcagtgaccactttaccctgtctttctggatg
aagcatagtgtgactcctagcaaggggaagaaggaggaggagaccattgtatgtaacacc
attcagaacgaggacggctactctcactactcattgactgtccacggctgcagaatcgcc
tttctctactggccgttgcttgagagtgcacgcccggtcaagttcctctggaagctggag
caggtatgtgacgatgagtggcatcactacgccctgaacctcgagttccccacagtcacg
ctctatactgatggcatctccttcgacccagctctcatccacgacaatggtctcatccac
ccacccaggagggaacctgcgctcatgatcggggcctgctggtctgaagagaagaacaaa
gagaaggagaaggggggagagaacagtacagacacgacctcaggagaccccttgccgatc
caccattacttccatggctacctagctggtttcagcgtgcgctcaggtcgcctggagagc
cgtgaggtcatcgagtgcctctatgcatgtcgggaggggctggactatagggatttcgag
agcctgggcaaaggcatgaaggtgcacgtgaacccctcgcagtccctgctcaccttggag
ggggatgatgtggagaccttcaaccatgccctgcagcacgtggcttacatgaacactctg
cgctttgccacgcccggcgtcaggccccttcgcctcaccaccgctgtcaagtgctttagt
gaagagtcctgtgtctccatccctgaagtggagggctatgtggtggttcttcagcccgat
gccccccagatccttctgagtggcacagctcattttgcccgcccagctgtggactttgag
ggacccgagggagtccccttgttccctgatcttcagatcacctgctccatttctcaccag
gtggaggccaaagcagatgagagttggcagggcacagtgacagacacacgcatgtcagat
gagattgtacacaacttggacggctgtgagatttctctggtgggggatgacctagaccct
gaacgagagagcctgctcttggacatggcttccctgcagcagcgaggcctggaactcacc
aacagatctgcctacctcaccattgctggggtggagaccatcactgtgtatgaagagatc
ctgaggcaggctcgttatcagcttcggcatggagctgccctttatgccaggaaattccgg
ctttcttgctcggagatgaacggccgatactccagcaacgaattcattgtggaggtcaac
gtcctgcacagcatgaaccgggtggcccatcccagccacgtgctcagttcacagcagttc
ctgcaccggggtcaccagcctcctcctgagatggctggacacagcctggccagctcccac
cggaactccatggtccccagtgctgcgactctcatcattgtggtatgcgtgggctttctg
gtgcttatggtcatcctcggcctcgtgcggatccactcccttcatcgccgtgtctcagga
actggtggaccctcaggggcttccgctgacccgaaagaccctgacctcttctgggatgac
tctgctctcaccattatcgtgaatcccatggagtcctaccagaaccagcagactggtgtg
gcaggggttgctggtggccagcaagaggaagaggacagcagtgattccgaagcagctgac
tcccccagcagcgatgaaagacgcatcattgagagccccccacaccgctattga
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