Rattus norvegicus (rat): 171500
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Entry
171500 CDS
T01003
Symbol
Stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform LL (A)
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
171500 (Stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
171500 (Stau2)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
171500 (Stau2)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
171500 (Stau2)
mRNA cycle factors
Stress granule specific factors
171500 (Stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
171500
NCBI-ProteinID:
NP_001007150
RGD:
621479
Ensembl:
ENSRNOG00000042458
UniProt:
Q68SB1
LinkDB
All DBs
Position
5:7623528..7868206
Genome browser
AA seq
571 aa
AA seq
DB search
MANPKEKTPMCLVNELARFHSIQPQYKLLNESGPAHSKMFSVQLSLGEQTWESEGSSIKK
AQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKP
FPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQ
NEPIPEKSPQNGESGKEMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFV
TRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVIEKPKLFFKKRPKTIIKAGP
EYGQGMNPISRLAQIQQARKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKI
AKKNAAEAMLLQLGYKASTSLQDQLDKTGENKGWSGPKPGFPEPANNTPKGILHLSPDVY
QEMEASRHRVTSGTTLGYLSPKDMNQPSSSFFSVESPSPTSSAPAARELLMNGTSPAAEA
IGLKGSSPTPPCSSVQPSKQLEYLARIQGFQAALSALKQFSEQGLESIDGVVNVENGSLE
KQAKHLREKADNNQANPGSITQDCKKSKSVI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcccaaagagaaaactccaatgtgtctggtaaatgagttagcccgtttccat
agcatccaaccccagtataaacttctgaatgaaagcgggcctgctcattcgaagatgttt
tcggtgcagctgagtctgggtgagcagacatgggaatccgaagggagcagtataaagaag
gcccaacaggctgttgcaaataaagctttgactgaatctacgcttcccaaacccgttcag
aaaccacccaaaagtaatgtcaataataacccaggcagtataactccgactgtggaactg
aatgggcttgctatgaaaaggggagagcctgccatctacaggccgttagacccaaagcca
ttcccaaattatagagctaattacaacttccggggcatgtacaaccagagatatcattgc
ccaatgcccaagatcttttatgttcagttgactgtaggaaataatgaattctttggcgaa
gggaagactcggcaagctgccagacacaatgctgcgatgaaagctcttcaagccctacag
aatgagccaattccagaaaagtctcctcagaatggtgaatcaggaaaagaaatggatgac
gataaagatgcaaataaatctgaaataagcttagtgtttgaaattgcgctgaagagaaat
atgcccgtcagttttgaggttattaaagaaagtggaccaccacatatgaagagttttgtt
acccgggtgtcagtgggagaattttctgcagaaggagagggaaatagcaaaaagctctcc
aagaagcgtgcagcaaccacggtcttacaggagcttaagaaactcccacctcttcctgtg
atagagaagccaaaactattttttaaaaaacgccctaaaacaataataaaggctggaccc
gagtatggtcaaggaatgaaccccattagccgcctggctcaaatccagcaggccagaaag
gaaaaggagcctgattacgttttactttcagaacgtggaatgcctcgccgtcgagagttt
gtaatgcaggtcaaggtaggcaatgaagttgcgactggaacaggacctaataaaaagata
gccaagaaaaatgctgcagaagctatgctgttacagctcggctataaagcgtccactagt
cttcaggatcagctcgacaagaccggggaaaacaaaggatggagtggtccaaagcctgga
tttccggaaccagcgaataacactccaaaaggaattcttcatctttctcctgatgtttat
caagagatggaagccagccgccacagagtgacctctggcacaactctaggctacttatca
cccaaagatatgaaccaaccttcaagctccttcttcagtgtagagtctccctcaccgact
agttcagccccagctgccagggaactcctaatgaatggaacatctcctgctgctgaagcc
ataggtttaaaaggaagttctcctactcccccttgttcttcagtacagccttcaaaacaa
ctggaatatttagcaaggattcaaggctttcaggcagccttaagtgccttgaaacagttt
tctgaacaaggactggaatcaattgatggggtggtgaatgttgaaaacggctctcttgaa
aaacaagccaagcatctgcgggagaaagcggacaataaccaggcaaacccaggctccatc
actcaggactgcaagaaatcaaagtcggtcatctag
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