Rattus norvegicus (rat): 171554
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Entry
171554 CDS
T01003
Symbol
Cdhr5
Name
(RefSeq) cadherin-related family member 5 precursor
KO
K16505
cadherin-related family member 5
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
171554 (Cdhr5)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Cadherin related
171554 (Cdhr5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
171554
NCBI-ProteinID:
NP_612534
RGD:
620504
Ensembl:
ENSRNOG00000017762
UniProt:
Q9JIK1
A6HXT3
LinkDB
All DBs
Position
1:complement(205802686..205811184)
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AA seq
862 aa
AA seq
DB search
MGAPALLWPPLLLPLLTVLFGHLPGTLAQAQVCSANQTVFTMNENTTVSGPLADIFVPED
QYVTLGQLSTPNAFKVEGNKLFLIVTPDYEENSLLEAVLECKRGDTLVTQFRVFVAVLDI
NDNAPEFPFTIKEYNVSEDTRVNTIVIPETELKATDADKDDILVYTLQEVTPNASKFFSL
VGINSPALKLDQTLDYYKSPNMTFRLLARDTREENVIPSHTATATVVLNVLPADLRTPWF
LPCSFTDDYFCIQAQYHTVIPTGHKLPSPLILSPGPIYAVDGDQAINQPIVYSIMMGNTD
DTFIINKDDGNLTMAKSIPSPMTFTLVVRAEQADMARYSVTQAVVEARDVTGNPLQFSQS
LYFGTVVLGSEAGTAVKDKTFPSEILRIQAQYLGFPDLNSAVTYQVTNSSEFIMNKDILL
TTVPMETERTIRIEVEANNTVTKDIATTIVEIQVSEREPPSTESPTPPEAGGTTGPSSNT
TLETPSTSGTSQGPATTSSGGSAGPFPPAGTTLSPLTSAPTVPGGSPTLGISTSPQTATP
GGDATQTPKPGTSQPMVPTPGASTSSQPATPSGSSTQTPKPGTSQPMVPTPGASTSSQPA
TPSGSSTQTPRPGTSQPMVPTPGASTSSQPATPSGSTQTPKPGTSQPTTTGPISGVGELG
DGQRFSTVDMAVLGGVLGALLLLALIFLIILIHKHYRHRFTCCSGKAKEPQPSGYDNLTF
LPDNKAKWSPTSNRKPEPGPEPVQPPLRPPSPMSSSPTPPSSMPPSPQPKASGSPKTVQA
GDSPSAVRSILTKERRPEGEGGYKAVWFGKDIGAEADVVVLNEPTADVDSASASGSEGSD
DDDDPDQKKSLRLGAVADNTYV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgggggctccggccctcctgtggcctcccctgctgttgccattgctcacggtgctgttt
ggccaccttccagggaccttggcccaggctcaggtctgctctgcgaaccagaccgtgttt
acaatgaacgagaacaccactgtttctgggccactggcggacatttttgtcccagaagac
cagtatgtgaccttgggacagttgtccacccctaatgcctttaaggttgagggcaataag
ctgtttctcatcgtgactccagattatgaggaaaactctttgctggaggcagtcctggag
tgtaagagaggagatactttggtgacacagttcagggtgtttgtggctgtcctggacatc
aatgacaatgcaccagaattcccctttacaatcaaggaatataatgtatcggaggacacc
agagtgaatacgatcgtcatccctgagacagagctgaaggctacagatgctgacaaagat
gacatcctagtctacactctgcaggaagtgacccccaatgccagcaagttcttctccctg
gtgggcataaactcccctgctctgaagttggaccagactctggattactacaagagtccg
aacatgaccttcaggctgctggcacgggatactagggaagagaatgtaattcccagccat
acggccactgccaccgtggtcttgaacgtgctgccagctgacctacggaccccctggttc
ctgccgtgctcctttacggatgactacttctgcattcaggcccagtaccacacagttatc
cccacaggacacaaactgccatcccctctcatcttgagtcctggtcccatctatgctgtg
gacggagatcaggccattaaccagcctatcgtctacagcattatgatgggaaacacggat
gacacatttatcatcaacaaagacgatggcaacctcacgatggccaaaagtatccccagc
cccatgaccttcaccctggtggtcagggctgagcaggctgacatggctcgatactcagtg
actcaggccgttgtggaggctcgagatgtcactgggaacccactccagttctctcagagc
ctgtactttggcacggtggtactgggttctgaggctggcacagcagtgaaggacaagacc
ttcccttcagagatcctgaggatccaggctcagtacctaggcttcccggacctcaactcg
gctgtcacatatcaagtcaccaactcctcagaattcatcatgaataaggatatcttgctg
accactgtgcctatggagacagaaagaacaatccgcatagaggtagaagctaacaatact
gtgactaaagacatagccaccactattgtggagatccaggtgtcagagcgagagccgccc
tccacagagtcccccacacccccagaagctggaggaacaactgggccttcaagtaacacc
actttggaaaccccctcgacctctgggacctctcaaggacctgccacaaccagctctggg
ggaagtgctggcccattcccacctgcaggcacaactctaagcccactcacctctgcccca
actgtacctggggggtcccctactcttggaatcagcacctctccccagacagctactcct
ggtggggatgcaacacagacccccaaaccaggtacctctcagccaatggtccccactcca
ggggctagcacctcttctcagccagccacacctagtggcagctcaacccagacccccaaa
ccaggaacctctcagccaatggtccccactccaggggctagcacctcttctcagccagcc
acacctagtggcagctcaacccagacccccaggccaggaacctctcagccaatggtcccc
actccaggggccagcacctcttctcagccagccacacctagtggctcaacacagaccccc
aagccaggaacctctcagccgacaaccactgggcccatatcaggagtaggcgagctgggt
gatggccagagattttccacggtggacatggcagtgttgggcggggtgctaggggcactg
ctgttgctggccctcatcttcttgatcatcctcatccataagcactaccgacatcggttc
acttgctgctctggcaaggcaaaggagccacagccaagtggctatgacaacctgaccttc
ctcccagacaacaaggccaagtggtcacccacctccaaccggaagccagagccgggccct
gagcctgtccagccgcccctccggcctcctagtcccatgtcttccagtcccacgcccccc
agctccatgcctcctagccctcagcccaaagcttccgggtctcccaagacagtccaggca
ggggacagtccttcagccgtgaggtctatcctgactaaggagcggcggccggagggggag
ggcggctacaaggctgtgtggttcggcaaggacatcggggcagaggctgatgtggtggtt
ctcaacgaacccaccgccgacgtggacagcgccagtgcctcgggaagtgaggggagcgat
gatgatgatgaccctgaccagaagaagagtctccgccttggcgcagtcgcagacaacact
tacgtctag
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