Rattus norvegicus (rat): 191573
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Entry
191573 CDS
T01003
Symbol
Grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A isoform 1 precursor
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04020
Calcium signaling pathway
rno04024
cAMP signaling pathway
rno04080
Neuroactive ligand-receptor interaction
rno04082
Neuroactive ligand signaling
rno04724
Glutamatergic synapse
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05030
Cocaine addiction
rno05031
Amphetamine addiction
rno05033
Nicotine addiction
rno05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
191573 (Grin3a)
04024 cAMP signaling pathway
191573 (Grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
191573 (Grin3a)
04082 Neuroactive ligand signaling
191573 (Grin3a)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
191573 (Grin3a)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
191573 (Grin3a)
05020 Prion disease
191573 (Grin3a)
09165 Substance dependence
05030 Cocaine addiction
191573 (Grin3a)
05031 Amphetamine addiction
191573 (Grin3a)
05033 Nicotine addiction
191573 (Grin3a)
05034 Alcoholism
191573 (Grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
191573 (Grin3a)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Glutamate (ionotropic)
191573 (Grin3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
191573
NCBI-ProteinID:
NP_612555
RGD:
621704
Ensembl:
ENSRNOG00000005723
UniProt:
Q9R1M7
A6KJD3
Structure
PDB
PDBj
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All DBs
Position
5:complement(68802333..69001880)
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AA seq
1135 aa
AA seq
DB search
MRRLSLWWLLSRVCLLLPPPCALVLAGVPSSSSHPQPCQILKRIGHAVRVGAVHLQPWTT
APRAASRAQEGGRAGAQRDDPESGTWRPPAPSQGARWLGSALHGRGPPGSRKLGEGAGAE
TLWPRDALLFAVENLNRVEGLLPYNLSLEVVMAIEAGLGDLPLMPFSSPSSPWSSDPFSF
LQSVCHTVVVQGVSALLAFPQSQGEMMELDLVSSVLHIPVLSIVRHEFPRESQNPLHLQL
SLENSLSSDADVTVSILTMNNWYNFSLLLCQEDWNITDFLLLTENNSKFHLESVINITAN
LSSTKDLLSFLQVQMDNIRNSTPTMVMFGCDMDSIRQIFEMSTQFGLSPPELHWVLGDSQ
NVEELRTEGLPLGLIAHGKTTQSVFEYYVQDAMELVARAVATATMIQPELALLPSTMNCM
DVKTTNLTSGQYLSRFLANTTFRGLSGSIKVKGSTIISSENNFFIWNLQHDPMGKPMWTR
LGSWQGGRIVMDSGIWPEQAQRHKTHFQHPNKLHLRVVTLIEHPFVFTREVDDEGLCPAG
QLCLDPMTNDSSMLDRLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIV
GDGKYGAWKNGHWTGLVGDLLSGTANMAVTSFSINTARSQVIDFTSPFFSTSLGILVRTR
DTAAPIGAFMWPLHWTMWLGIFVALHITAIFLTLYEWKSPFGMTPKGRNRNKVFSFSSAL
NVCYALLFGRTAAIKPPKCWTGRFLMNLWAIFCMFCLSTYTANLAAVMVGEKIYEELSGI
HDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHEYMRRYNVPATPDGVQYLKNDPEKLD
AFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPPNSPLTSNISELISQYKSHGFM
DVLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVLLCIGFGLSILTTIGEHIVHRLLL
PRIKNKSKLQYWLHTSQRFHRALNTSFVEEKQPRSKTKRVEKSRWRRWTCKTEGDSELSL
FPRSNLGPQQLMVWNTSNLSHDNQRKYIFNDEEGQNQLGTQAHQDIPLPQRRRELPASLT
TNGKADSLNVTRSSVIQELSELEKQIQVIRQELQLAVSRKTELEEYQKTNRTCES
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactgagtttgtggtggctgctgagcagggtctgtctgctgctgccgccgccc
tgcgcactggtgctggccggggtgcccagctcctcctcgcacccgcaaccctgccagatc
ctcaagcgcatcggacacgcggtgagggtgggcgcggtgcacttgcaaccctggaccacg
gccccacgcgcagccagtcgcgctcaggaaggcggcagggcgggtgcccagagggatgat
ccagagtccgggacgtggcggccaccggcgccctcgcaaggcgcacgctggttggggagc
gccctgcatggccggggtccacccggctcccgaaagctcggggagggcgcgggggccgag
accctgtggccgcgggatgccctactgttcgctgtggaaaacttgaaccgtgtggaaggg
ctcctaccctacaacctgtctttggaagtagtgatggccattgaggcgggcctgggcgat
ctgccgcttatgcccttctcttccccaagctcaccgtggagcagtgaccctttctccttt
ctgcagagcgtgtgccacaccgtagtggtacaaggggtgtcggcgctgctggccttcccc
cagagccagggcgaaatgatggagctggacttggtcagctctgtcctgcacatcccagtg
ctcagcatagtgcgccacgagtttccgcgggagagtcagaatcccctgcacctacagctg
agtttagaaaactcactaagttctgatgctgatgtcactgtctcaatcctgaccatgaac
aactggtacaattttagcttgttgctctgccaggaagactggaatatcacggacttcctc
ctccttacggagaataactccaagttccacctcgagtctgttatcaacatcactgctaat
ctgtcctccacaaaggaccttctaagtttcctgcaggtccagatggacaacattaggaac
agcacacccacaatggtgatgtttggctgtgacatggacagtatccggcagatatttgaa
atgtccacacagtttgggctatcacctcctgaacttcactgggttttaggagactcccag
aatgtggaggaactgaggacagaaggcctgcccttagggctcattgctcatggaaaaacc
acacaatctgtctttgagtactacgttcaggatgccatggagttggttgcaagagctgta
gccacagccaccatgatccagccagagcttgctctccttcccagcacaatgaactgcatg
gatgtgaaaaccacaaatctcacttctggacagtatttatcaaggtttttagccaacacc
actttcagaggtctcagtggttccatcaaagtaaagggctccaccatcatcagctcagag
aacaactttttcatctggaacttgcagcacgaccctatgggaaagccaatgtggactcgc
ctgggcagctggcaaggaggaaggatagtcatggactctggaatatggccagagcaggcc
cagaggcacaaaacccacttccagcacccaaacaagttacacttgagagtggtgacattg
attgaacacccatttgttttcacgagagaagtagacgatgaaggcttatgccctgctgga
cagctctgtctagaccctatgactaacgactcttccatgctggatcgtctgtttagcagc
ctgcatagcagtaatgacacagtgccaatcaagttcaagaagtgctgttatgggtactgc
atcgatctcctggagcagctagcagaagacatgaactttgactttgacctctacattgta
ggggatggaaagtacggagcttggaaaaatggtcactggactgggctggttggtgatctc
ctgagtgggacagccaacatggcggtcacttctttcagcatcaataccgcacgaagccag
gtgatagatttcaccagccctttcttctcaaccagtttggggatcttagtgaggactcga
gacacagcagctccaattggagccttcatgtggccactccactggaccatgtggctggga
attttcgtggctctccatatcactgccatttttctcactctgtatgaatggaagagcccc
tttggtatgacccctaaggggaggaacagaaacaaagtcttctccttctcctcagctttg
aatgtctgctatgcccttctgtttggcagaacagcagccatcaaacccccaaaatgctgg
actggaaggtttctgatgaatctttgggccattttctgtatgttttgcctttctacatac
acagcgaacttggctgctgtcatggtaggtgagaagatctatgaagagctttctggaatt
catgaccctaagcttcatcatccttctcaaggcttccgctttggaactgtccgggaaagc
agtgctgaagactatgtgcgccagagcttcccagagatgcatgagtacatgagaaggtac
aacgtgccagccacccctgatggagtgcagtatctgaagaatgatccagagaaactagac
gccttcatcatggacaaagcccttctggattatgaagtgtcaatagatgctgactgcaag
cttctgaccgtaggaaagccatttgccatcgaaggatatggcattggtctccctccaaac
tctccattgacctctaatatatctgagctcatcagtcagtacaagtctcacgggtttatg
gatgtgctccatgacaagtggtacaaggtggttccctgcggaaagagaagctttgccgtc
actgagactttgcaaatgggcatcaagcacttctctggactcttcgtgctgttgtgcata
ggatttggtctctccatcctgaccaccattggtgaacacatagtgcacagactgctgtta
ccacgcatcaaaaacaaatccaagctgcagtactggctgcacacgagtcagaggtttcac
agagcattaaacacgtcattcgtagaagaaaagcagccacgttccaagacaaaacgtgtg
gagaagagcagatggagaagatggacctgcaagacagaaggggactctgaattgtctctg
tttcctaggtccaacctgggaccccagcagctcatggtatggaatacttccaatctgagt
catgacaaccaacgaaaatacatctttaatgacgaggaaggacaaaaccagctgggtacc
caggcccaccaggacatccctctccctcagaggagaagagagctccctgcctcactgacc
accaatgggaaagcagactccctcaatgtaactcggagctccgtgattcaggaactctct
gagttggagaagcagatccaagtgatccgccaggagctgcagttggctgtaagcaggaag
acagagctggaggagtatcaaaagacaaatcggacttgtgaatcctag
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