Rattus norvegicus (rat): 192154
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Entry
192154 CDS
T01003
Symbol
Hip1
Name
(RefSeq) huntingtin-interacting protein 1 isoform 2
KO
K04559
huntingtin interacting protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05016
Huntington disease
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
192154 (Hip1)
05022 Pathways of neurodegeneration - multiple diseases
192154 (Hip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
192154 (Hip1)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
192154 (Hip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
192154
NCBI-ProteinID:
NP_001402685
RGD:
620305
Ensembl:
ENSRNOG00000001448
LinkDB
All DBs
Position
12:26769868..26904367
Genome browser
AA seq
1038 aa
AA seq
DB search
MDRMASSMKQVPNPLPKVLSRRGVGAGMEAAERESFERTQTVSVNKAINTQEVAVKEKHA
RTCILGTHHEKGAQTFWSVVNRLPLSSNAMLCWKFCHVFHKLLRDGHPNVLKDSLRYKNE
LSDMSRMWGHLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNN
FFQLTVEMFDYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTV
KLLFKLHSCLPADTLQGHRDRFMEQFTKLKDLFQRSSNLQYFKRLIQIPQLPENPPNFLR
ASALSEHISPVVVIPAEVSSPDSEPVLEKDDLMDMDASQQSLFDNKFDDIFGSSLSSDPF
NFNNQNGVNKDEKDHLIERLYREISGLTGQLDNVKIESQRAMLQLKGRVSELEAELAEQQ
HLGRQATDDCEFLRTELDELKRQREDTEKAQRSLTEIEKKAQANEQRYSKLKEKYSELVQ
NHADLLRKNAEVTKQVSVARQAQVDLEREKKELADSFARVSEQTQRKTQEQQDVLETLKH
ELATSRQELQVLHGNLETSAQSEAKWLTQIAELEKEQGSLATAAAQREEEFSALRDQLES
TQLKLAGAQDSMCQQIKDQRRILLAGARKAAELEIQEALGQLEEPALLISCAGATDHLLS
KVNSVSSCLEQLEKSRSQYLACPEEISELLHSITLLGHLTSDTIIQGTATSLRAPPESAD
SLTEACRQYGRETLAYLSSLEEEGAMEKADTTAIANCLGKIKTIGEELLPRGLDIKQEEL
GDLVDKEMAATSAAIEAATTRIEEILSKSRAGDTGVKLEVNERILGSCTSLMQAIKVLVV
ASKDLQKEIVESGRGTASPKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGKGK
FEELMVCSHEIAASTAQLVAASKVKANKGSLNLTQLQQASRGVNQATAAVVASTISGKSQ
IEETDSMDFSSMTLTQIKRQEMDSQVRVLELENDLQKERQKLGELRKKHYELAGVAEGWE
EGTEASPSAVQEAVPDKE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggaccggatggccagctccatgaagcaggtacccaacccgctgcccaaagtgttgagc
cggcgcggggttggtgctgggatggaggctgcggagcgcgagagcttcgagcggactcag
acggtcagcgtcaataaggccattaatacgcaggaagtggccgtgaaggaaaaacatgcc
aggacgtgtattctgggcacccaccatgagaaaggggcgcagaccttctggtctgtggtc
aaccgactgcctctctccagcaacgccatgctgtgctggaagttctgccacgtgttccac
aaactccttcgagacggacatccgaacgtgctgaaagactctctcagatacaaaaatgag
ttaagcgacatgagcaggatgtggggccacctgagtgaggggtatggacagctctgcagc
atctacctcaaactgctgagaacaaggatggagtaccacaccaaaaatcccaggttccca
ggtaacctccagatgagcgaccggcagctggatgaagctggggaaagtgatgttaacaac
tttttccagctcacagtggagatgtttgattacctggagtgcgaactgaacctctttcaa
actgtgttcaactccttggacatgtcccgctcagtgtccgtgaccacagctggccagtgc
cgcctcgccccgctcatccaggtcatcctggactgcagtcacctctatgactacactgtc
aagctgctcttcaagctccactcctgtcttccagctgacaccctgcagggccaccgagac
cgcttcatggagcagttcacaaagttgaaagatctgtttcagcgctccagcaaccttcag
tacttcaagcggctcattcagatcccccagttgcctgagaatccacccaacttcctacga
gcctcggccctgtccgagcacatcagtcctgtggtggtgatcccggctgaggtgtcgtct
ccagacagtgagcccgtcctggagaaggatgacctcatggacatggatgcctcccagcag
agtttgtttgacaacaagtttgatgacatcttcggcagctcgttgagcagtgaccccttc
aatttcaacaatcaaaatggcgtgaacaaggatgagaaggaccacttgattgaacgcctc
tacagagagatcagtggactgacaggacagctggacaacgtgaagattgagagccagcgg
gccatgctgcagctgaagggtcgcgtgagtgagctggaagcagagctggccgagcagcag
cacctgggacggcaggctacggatgactgcgagttcctgcgcacggagctggatgaactg
aagaggcagcgagaggacactgagaaggcgcagcgcagcctgactgagatagaaaaaaag
gcccaggccaatgaacagcggtatagcaagttaaaagagaagtacagtgaactggtgcag
aaccatgctgatctgctgcggaagaatgcagaggtgaccaagcaggtgtctgtggcccgg
caagcccaggtggatttggaaagagagaaaaaagaactagcggattcctttgcacgtgta
agcgagcagacccagcggaagactcaagagcaacaggatgttctagagaccctgaagcac
gaactggccaccagcaggcaagagctgcaggtcctccatggcaacctggaaacctctgcc
cagtctgaggcgaaatggctaacgcagatcgcggagctggagaaggaacaaggcagtttg
gcgacagccgccgctcaaagagaggaagagttctcagccctccgagaccaactggaaagc
acccagctcaaactggctggtgcccaggattccatgtgtcagcagataaaggaccagagg
agaatcctcttggcaggggccaggaaggctgcggagctcgagatacaggaggccctgggc
cagcttgaagagcctgccctcctcatcagctgtgcaggagccacagatcatcttctctcc
aaagtcaactccgtttccagctgcctcgagcaactggaaaagagccgcagccagtatctg
gcctgcccagaagagatcagtgagcttctgcactcaataaccctgcttggccacttgacc
agtgacaccatcattcaggggactgccaccagcctccgggccccaccagagtcagccgac
tctctgacggaggcctgtaggcagtatggcagagaaactctggcctatctgtcctcccta
gaggaagagggggccatggaaaaagctgacaccacagccatagcgaactgcctcggcaag
atcaagaccattggcgaggaactgctgcccaggggcttggacatcaagcaggaagagctg
ggtgacctggtggacaaggagatggcagccacttcagctgccattgaagctgccaccacc
cggatagaggaaattctcagtaagtcccgagcaggagacacgggagtcaagttggaggtg
aacgagaggatccttggctcctgtaccagcctgatgcaagctatcaaggtgctcgttgtg
gcctccaaggacctccagaaggagatagtggaaagcggcaggggtaccgcatcccctaaa
gaattttacgccaagaactctcggtggacagaagggctcatatctgcctccaaagctgtt
ggttggggagctaccatcatggtggatgctgctgaccttgtggtccaaggcaaagggaag
ttcgaggagctgatggtgtgctcgcatgagattgccgctagcacagcccagcttgtggct
gcatccaaggtgaaagcgaacaagggcagcctcaatctgacccagctgcagcaggcctct
cggggagtgaaccaggccacggccgctgtggtggcctcaaccatttccggcaaatctcaa
attgaggaaacagacagtatggacttctcaagcatgacactgacccagatcaagcgccag
gaaatggattcccaggttagggtgctggagctagaaaacgacctgcagaaggagcgccag
aaactaggagagcttcggaaaaaacactacgagctggctggtgttgctgagggctgggaa
gaagggacagaagcatcaccttctgctgttcaagaagcggtgccggacaaagagtag
DBGET
integrated database retrieval system