Rattus norvegicus (rat): 192183
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Entry
192183 CDS
T01003
Symbol
Nectin1
Name
(RefSeq) nectin-1 precursor
KO
K06081
poliovirus receptor-related protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03266
Virion - Herpesvirus
rno04514
Cell adhesion molecules
rno04520
Adherens junction
rno05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
192183 (Nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
192183 (Nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
192183 (Nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
192183 (Nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
192183 (Nectin1)
04090 CD molecules [BR:
rno04090
]
192183 (Nectin1)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
Nectin family
192183 (Nectin1)
CD molecules [BR:
rno04090
]
Proteins
192183 (Nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
192183
NCBI-ProteinID:
NP_001093946
RGD:
620791
Ensembl:
ENSRNOG00000006403
UniProt:
A6J3U6
F1LNP8
LinkDB
All DBs
Position
8:52998662..53061745
Genome browser
AA seq
515 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGTHTQVVQVNDSMYGFIGTDVILHCSFANPLPTV
KITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSHLELEDEG
MYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRARKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHLDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRTDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPINYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPTPEHGRRAGQMPTAIIGGVA
GSVLLVLIVVGGIIVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPDD
SDDEKKAGPLGGSSYEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgccttcttcctcccaggcactcacacgcaggtggtgcaggtgaacgactccatgtat
ggcttcatcggcacagatgtgattctgcactgcagctttgccaacccactgcccactgtg
aagatcacccaggtcacatggcagaaggcctccaatggctccaagcagaacatggccatc
tacaacccaacgatgggtgtttccgtgctgcctccctacgagaaacgagtggagttcctg
cggccctccttcattgacggcaccatccgcctctcccacctggagctggaggacgagggc
atgtacatctgtgaatttgccaccttccccacgggcaaccgggaaagccagctcaatctc
actgtgatggccaaacccaccaactggatcgagggcactcaggctgtgcttcgagccagg
aagggacaggatgacaaggtcctggtggccacctgcacctcagccaacgggaagcctccc
agcgtggtgtcctgggaaacgaggctgaagggcgaggcagagtaccaggaaattcggaac
cccaacggcacagtgacagtcatcagccgttaccgcttggtgcccagcagggaagcccac
cggcagtccctggcctgcatcgtcaactatcacctggaccgcttcagggagagcctgaca
ctcaacgtgcagtatgaacctgaggtgaccattgaaggcttcgatggcaactggtaccta
cagcggacagatgtaaagcttacgtgcaaagcagacgctaatccgccggccactgagtac
cactggaccacgttgaatggctctctccccaagggtgtagaggcccagaacagaaccctc
ttcttccggggacctatcaactacagcctagcaggaacctacatctgtgaggccaccaac
cctattggcacccgctctggccaggtggaggtcaatatcacagaattcccctacaccccg
actcctgaacatgggcggcgcgcggggcagatgcccacagccatcattgggggcgtggca
gggagtgtcctgctggtgctgattgtggttggagggatcatagtggccctgcgccggcgc
cggcacaccttcaagggtgactacagcaccaagaaacacgtatacggcaacggctacagc
aaggcaggaatcccccagcatcacccgcccatggcacagaacctgcagtacccggatgac
tcggatgatgaaaagaaggccggcccattgggcgggagcagctatgaggaggaagaagag
gaggagggcggtggaggaggcgaacgcaaagtgggcggcccccaccccaaatatgacgag
gacgccaaacggccctacttcactgtggatgaggctgaggcccgtcaggacggctatggg
gaccggactctgggctaccaatacgaccctgaacagctggacttggctgagaacatggtt
tctcagaacgacgggtctttcatttccaagaaagagtggtatgtgtag
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