Rattus norvegicus (rat): 207123
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Entry
207123 CDS
T01003
Symbol
Phaf1
Name
(RefSeq) phagosome assembly factor 1
KO
K27411
phagosome assembly factor 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
207123 (Phaf1)
Membrane trafficking [BR:
rno04131
]
Autophagy
Other autophagy associated proteins
Others
207123 (Phaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
207123
NCBI-ProteinID:
NP_620609
RGD:
621098
Ensembl:
ENSRNOG00000014668
UniProt:
O08654
LinkDB
All DBs
Position
19:50011350..50050880
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AA seq
422 aa
AA seq
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MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNL
TQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NSAEQLFHLNFRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGATVKRMYIYSGNSLQ
DTKAPMMPLSCFLGNVYAESVDVLRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVY
FGDSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDAN
THKVKKFVLHTNYPGHYNFNIYHRCEFKIPLAIKKENAGGQTEICTTYSKWDSIQELLGH
PVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPPRPGAHLRTAE
LP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgctggacctggaggtggtgcctgaacgctctctggggaacgagcaatgggaattcaca
ctgggaatgcctctggctcaggcagtagccattcttcagaagcactgtcgcatcatcaaa
aatgtccaggttctctacagtgagcagtctcctctaagccatgacctcatccttaacctg
actcaagacgggatcaagctactgtttgatgctttcaatcagagacttaaggtgattgaa
gtttatgacttaacaaaagtaaagttaaagtattgtggagtgcattttaactctcaggcc
atcgctcctaccattgagcaaattgaccagtcttttggtgcaacccatccaggagtgtac
aactctgctgagcagctcttccacctcaacttcagaggactgtctttctcttttcagtta
gactcatggacggaggctcccaagtatgagcccaattttgcccatggtctagcttctctt
cagataccccatggagcaactgtaaaacgaatgtacatctatagtggaaacagcctccag
gataccaaggctcctatgatgcccctgagctgtttcctggggaatgtatatgctgaaagt
gtagacgttcttcgagacggaactggaccctcagggttgcgacttcgcttgctcgctgca
ggttgtggacccggagtattggcagatgccaaaatgagagtatttgagcgtgcggtgtat
tttggtgattcttgccaagatgttcttagcatgcttggctctccacacaaagtcttctat
aaatctgaagacaagatgaaaattcactctccttcccctcataaacaagttccatccaag
tgcaatgactacttttttaactatttcactcttggagtggacatcctgtttgatgcaaat
acacacaaagtgaagaagtttgtcctgcataccaattaccctgggcattataattttaac
atttaccaccgctgtgagttcaagatcccactagccataaagaaagaaaatgcaggtggt
caaaccgaaatatgcacaacctacagcaagtgggacagcatccaggagcttctgggccat
cctgtggaaaagccggttgtcttgcacagatcctcatccccaaataacaccaacccattt
ggctctacattctgctttggtcttcagcggatgatctttgaggtcatgcagaacaaccac
attgcctcagtgaccctgtatggcccccctaggcctggtgcccacctgagaacagcagag
ctgccctaa
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