Rattus norvegicus (rat): 24392
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Entry
24392 CDS
T01003
Symbol
Gja1
Name
(RefSeq) gap junction alpha-1 protein
KO
K07372
gap junction alpha-1 protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04540
Gap junction
rno05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
24392 (Gja1)
09160 Human Diseases
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
24392 (Gja1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
24392 (Gja1)
Transporters [BR:
rno02000
]
Other transporters
Pores ion channels [TC:
1
]
24392 (Gja1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
Connexin43
Connexin40_C
Ammonium_transp
DUF4153
DUF2681
TEX29
DUF6377
Motif
Other DBs
NCBI-GeneID:
24392
NCBI-ProteinID:
NP_036699
RGD:
2690
Ensembl:
ENSRNOG00000000805
UniProt:
P08050
A0A654ICE6
Structure
PDB
PDBj
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All DBs
Position
20:36302490..36315010
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AA seq
382 aa
AA seq
DB search
MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG
CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKVAQTDG
VNVEMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSVFEVAFLLIQWYIYGFS
LSAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFYVFFKGVKDRV
KGRSDPYHATTGPLSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRN
YNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDNQNAKKVAAGHELQPLAIVD
QRPSSRASSRASSRPRPDDLEI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactggagtgccttggggaagcttctggacaaggtccaagcctactccaccgct
ggagggaaggtgtggctgtcagtgctcttcatattcagaatcctgctcctggggacagct
gttgagtcagcttggggtgatgaacagtctgcctttcgctgtaacactcaacaacctggc
tgcgaaaacgtctgctatgacaagtccttccccatctctcacgtgcgcttctgggtcctt
cagatcatattcgtgtctgtgcccaccctcctgtacttggcccatgtgttctatgtgatg
aggaaggaagagaagctaaacaagaaagaagaggagctcaaagtggcccagactgacggg
gtcaacgtggagatgcacctgaagcagattgaaatcaagaagttcaagtacgggattgaa
gagcacggcaaggtgaaaatgaggggcggcttgctgagaacctacatcatcagcatcctc
ttcaagtctgtcttcgaggtggccttcctgctcatccagtggtacatctatgggttcagc
ttgagcgcggtctacacctgcaagagagatccctgcccccaccaggtagactgcttcctc
tcacgtcccacggagaaaaccatcttcatcatcttcatgctggtggtgtccttggtgtct
ctcgctttgaacatcattgagctcttctacgtcttcttcaaaggcgttaaggatcgcgtg
aagggaagaagcgatccttaccacgccaccactggcccactgagcccatcaaaagactgc
ggatctccaaaatacgcctacttcaatggctgctcctcaccaacggctccactctcgcct
atgtctcctcctgggtacaagctggttactggtgacagaaacaattcctcgtgccgcaat
tacaacaagcaagctagcgagcaaaactgggcgaactacagcgcagagcaaaatcgcatg
gggcaggccggaagcaccatctccaactcgcacgcccagccgttcgatttccccgacgac
aaccagaatgccaaaaaagttgctgctggacatgaactccagccattagccatcgtggac
caacgaccttccagcagagccagcagccgcgccagcagcaggcctcggcctgatgacctg
gagatttaa
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