Rattus norvegicus (rat): 24408
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Entry
24408 CDS
T01003
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform 1a precursor
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04014
Ras signaling pathway
rno04015
Rap1 signaling pathway
rno04020
Calcium signaling pathway
rno04024
cAMP signaling pathway
rno04080
Neuroactive ligand-receptor interaction
rno04082
Neuroactive ligand signaling
rno04713
Circadian entrainment
rno04720
Long-term potentiation
rno04724
Glutamatergic synapse
rno05010
Alzheimer disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05030
Cocaine addiction
rno05031
Amphetamine addiction
rno05033
Nicotine addiction
rno05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
24408 (Grin1)
04015 Rap1 signaling pathway
24408 (Grin1)
04020 Calcium signaling pathway
24408 (Grin1)
04024 cAMP signaling pathway
24408 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
24408 (Grin1)
04082 Neuroactive ligand signaling
24408 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
24408 (Grin1)
04720 Long-term potentiation
24408 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
24408 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
24408 (Grin1)
05014 Amyotrophic lateral sclerosis
24408 (Grin1)
05016 Huntington disease
24408 (Grin1)
05017 Spinocerebellar ataxia
24408 (Grin1)
05020 Prion disease
24408 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
24408 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
24408 (Grin1)
05031 Amphetamine addiction
24408 (Grin1)
05033 Nicotine addiction
24408 (Grin1)
05034 Alcoholism
24408 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
24408 (Grin1)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Glutamate (ionotropic)
24408 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
24408
NCBI-ProteinID:
NP_058706
RGD:
2736
Ensembl:
ENSRNOG00000011726
UniProt:
P35439
A6JT38
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(28501836..28528754)
Genome browser
AA seq
938 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNM
TGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKEN
ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRK
LVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTC
KEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVA
DGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTI
LVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDA
LTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRP
EERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQA
VRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSH
ENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRH
KDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRAITSTLASSFKRRRSSKDT
STGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttttcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcgcaagcatgaacag
atgttccgcgaggcagtaaaccaggccaataagcgacacggctcttggaagatacagctc
aacgccacttctgtcacccacaagcccaacgccatacagatggccctgtcagtgtgtgag
gacctcatctctagccaggtctacgctatcctagttagccacccgcctactcccaacgac
cacttcactcccacccctgtctcctacacagctggcttctacagaatccctgtcctggga
ctgactacccgaatgtccatctactctgacaagagtatccacctgagtttccttcgcacg
gtgccgccctactcccaccagtccagcgtctggtttgagatgatgcgagtctacaactgg
aaccacatcatcctgctggtcagcgacgaccacgagggacgggcagcgcagaagcgcttg
gagacgttgctggaggaacgggagtccaaggcagagaaggtgctgcagtttgacccagga
accaagaatgtgacggctctgctgatggaggcccgggaactggaggcccgggtcatcatc
ctttctgcaagcgaggacgacgctgccacagtgtaccgcgcagccgcaatgctgaacatg
acgggctctgggtacgtgtggctggtcggggaacgcgagatctctgggaacgccctgcgc
tacgctcctgatggcatcatcggacttcagctcatcaatggcaagaatgagtcagcccac
atcagtgacgccgtgggcgtggtggcacaggcagttcacgaactcctagagaaggagaat
atcactgacccaccgcggggttgcgtgggcaacaccaacatctggaagacaggaccattg
ttcaagagggtgctgatgtcttctaagtatgcggacggagtgactggccgtgtggaattc
aatgaggatggggaccggaagtttgccaactatagtatcatgaacctgcagaaccgcaag
ctggtgcaagtgggcatctacaatggtacccatgtcatcccaaatgacaggaagatcatc
tggccaggaggagagacagagaaacctcgaggataccagatgtccaccagactaaagata
gtgacaatccaccaagagcccttcgtgtacgtcaagcccacaatgagtgatgggacatgc
aaagaggagttcacagtcaatggtgacccagtgaagaaggtgatctgtacggggcctaat
gacacgtccccaggcagcccacgccacacagtgccccagtgctgctatggcttctgcata
gacctgctcatcaagctggcgcggaccatgaattttacctatgaggtgcacctggtggca
gatggcaagtttggcacacaggagcgggtaaacaacagcaacaaaaaggagtggaacgga
atgatgggcgagctactcagtggccaagcggacatgattgtggcaccactgaccatcaac
aatgagcgtgcgcagtacatagagttctccaagcccttcaagtaccagggcctgaccatt
ttggtcaagaaggagattcccaggagcacactggactcatttatgcagccttttcagagc
acactgtggttgctagtaggactgtcagttcatgtggtggctgtgatgctgtacctgctg
gaccgcttcagtccctttggccgattcaaggtgaacagtgaggaggaggaggaagatgca
ctgaccctgtcctctgccatgtggttttcctggggcgtcctgctcaactccggcattggg
gaaggtgccccccggagtttctctgcacgtatcctaggcatggtgtgggctggtttcgcc
atgatcatagtggcttcctacactgccaacttggcagctttcctggtgctggatcggcct
gaggagcgcatcacgggcatcaatgaccccaggctcagaaacccctcagacaagttcatc
tacgcaactgtaaagcagagctccgtggacatctacttccggaggcaggtggagttgagt
accatgtaccggcacatggaaaaacacaattacgagagcgcagctgaggccatccaggct
gtgcgggacaacaagctgcacgcctttatctgggactcggccgtgctggagtttgaggct
tcacagaagtgcgatctggtgaccacgggtgagctgttcttccgctcaggctttggcatc
ggcatgcgcaaggacagcccctggaagcagaacgtttccctgtccatactcaagtcccat
gagaatggcttcatggaagatctggataagacatgggttcggtatcaggaatgcgactcc
cgcagcaatgctcctgcaaccctcacttttgagaacatggcaggggtcttcatgctggtg
gctggaggcatcgtagctgggattttcctcattttcattgagatcgcctacaagcgacac
aaggatgcccgtaggaagcagatgcagctggcttttgcagccgtgaacgtgtggaggaag
aacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccacattt
agggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagacacg
agcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcgacgc
gctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
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integrated database retrieval system
