Rattus norvegicus (rat): 24508
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Entry
24508 CDS
T01003
Symbol
Irf1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04625
C-type lectin receptor signaling pathway
rno04668
TNF signaling pathway
rno04917
Prolactin signaling pathway
rno05133
Pertussis
rno05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
24508 (Irf1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
24508 (Irf1)
09152 Endocrine system
04917 Prolactin signaling pathway
24508 (Irf1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
24508 (Irf1)
09171 Infectious disease: bacterial
05133 Pertussis
24508 (Irf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
24508 (Irf1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
24508 (Irf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
24508
NCBI-ProteinID:
NP_036723
RGD:
2920
UniProt:
P23570
Q6DGG4
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All DBs
Position
10:38417935..38424946
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AA seq
328 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLSWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDTKSKTKRKLCGDSSPDTLSDGLSSSTLPDDHSSYTAQGYLGQDLDMDRDI
TPALSPCVVSSSLSEWHMQMDIMPDSTTDLYNLQVSPMPSTSEAATDEDEEGKLPEDIMK
LFEQSEWQPTHVDGKGYLLNEPGAQLSTVYGDFSCKEEPEIDSPGGDIEIGIQRVFTEMK
NMDPVMWMDTLLGNSTRPPSIQAIPCAP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcactcggatgcgaatgagaccctggctagagatgcagattaattccaaccaa
attccagggctgagctggatcaataaagaagagatgatcttccagatcccatggaagcat
gctgccaagcacggttgggacatcaacaaggatgcctgtctgttccggagctgggccatt
cacacaggccgatacaaagcaggggaaaaagagccagatcccaagacttggaaggcaaac
ttccggtgtgccatgaactccctaccagacatcgaggaagtgaaggaccagagcaggaac
aagggcagctctgctgtacgcgtgtaccggatgctgccacccctcaccaagaaccagagg
aaagagagaaagtccaagtccagccgtgacactaagagcaaaaccaagaggaagctgtgc
ggagattctagccctgacaccttatctgacggactgagcagctctactctgcctgatgac
cacagcagttacacagctcagggatacctgggtcaggacttggacatggacagggacatt
accccagctctgtcaccgtgcgtcgtcagcagcagtctctctgagtggcatatgcagatg
gacatcatgccagacagcaccactgatctgtacaacttgcaggtgtcgcccatgccctcc
acctctgaagctgcaacagatgaggatgaggaagggaagttacctgaggacatcatgaag
ctctttgaacagtctgagtggcagccgacgcacgtggatggcaagggatacttgctcaat
gaaccaggagcccaactctctactgtctatggagacttcagctgcaaggaggaaccagag
atcgacagccctggaggggacatcgagataggcatacagcgtgtcttcacagagatgaag
aatatggaccccgtcatgtggatggacaccctgctgggcaactctaccaggccgccctcc
attcaggctattccttgtgcaccataa
DBGET
integrated database retrieval system