Rattus norvegicus (rat): 24586
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Entry
24586 CDS
T01003
Symbol
Ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform 5 precursor
KO
K06491
neural cell adhesion molecule
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03265
Virion - Ebolavirus and Lyssavirus
rno04514
Cell adhesion molecules
rno05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
24586 (Ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
24586 (Ncam1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
24586 (Ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
24586 (Ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
24586 (Ncam1)
04090 CD molecules [BR:
rno04090
]
24586 (Ncam1)
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
24586 (Ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rno00537
]
24586 (Ncam1)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
24586 (Ncam1)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
NCAM1/2
24586 (Ncam1)
CD molecules [BR:
rno04090
]
Proteins
24586 (Ncam1)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
24586 (Ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rno00537
]
Others
24586 (Ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_6
C1-set
Ig_5
Adeno_E3_CR1
V-set_CD47
Pur_ac_phosph_N
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
24586
NCBI-ProteinID:
NP_113709
RGD:
67378
Ensembl:
ENSRNOG00000031890
UniProt:
P13596
Structure
PDB
LinkDB
All DBs
Position
8:complement(58762088..59062131)
Genome browser
AA seq
858 aa
AA seq
DB search
MLRTKDLIWTLFFLGTAVSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGE
KLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMF
KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGF
PEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDAS
IHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRP
EKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQ
GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPD
SENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDRVEPYSSTAQVQFDEPEATGGVP
ILKYKAEWKSLGEEAWHSKWYDAKEANMEGIVTIMGLKPETRYAVRLAALNGKGLGEISA
ATEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRALASEWKPEI
RLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTSAQPTAIPANGSPTAGLS
TGAIVGILIVIFVLLLVVMDITCYFLNKCGLLMCIAVNLCGKAGPGAKGKDMEEGKAAFS
KDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEKGPVETKSEPQESEAKPAPTE
VKTVPNEATQTKENESKA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaactaaggatctcatctggactttgtttttcctgggaactgcagtttccctg
caggtagatattgttcccagccaaggagaaatcagcgttggagagtccaaattcttcctg
tgtcaagtggcaggagatgccaaagataaggacatctcctggttctcccccaacggggag
aaactgagcccaaaccagcagcggatctcagtggtgtggaacgatgatgactcctctacc
ctcaccatctacaacgccaacattgatgatgccggcatttacaagtgcgtggtcaccgct
gaagacggcacccagtccgaggccactgtcaatgtgaagatcttccagaagctcatgttc
aagaatgcgccaaccccacaggagtttaaggaaggggaagatgctgtgattgtctgtgat
gtggtcagctctctgcccccaaccatcatctggaaacacaaaggccgagatgtcatcctg
aaaaaagatgtccggttcatagtcctatccaacaactacctgcagatccgaggcatcaag
aaaacagatgagggcacttaccgctgtgaaggcaggatcctggcccggggggagatcaac
ttcaaggacattcaggtcattgtgaatgtaccacccactgtccaggccagacagagcatc
gtgaatgccactgccaacctgggccagtctgtcaccctggtgtgtgatgccgatggcttc
ccagagcccaccatgagctggacaaaggatggggaacccatagagaatgaggaggaagat
gacgagaagcacatcttcagtgacgacagttcggagctgaccatcaggaatgtggacaaa
aatgacgaagccgaatacgtctgcatcgctgagaacaaggctggcgagcaggatgcctcc
atccacctcaaggtcttcgcaaagcccaaaatcacctatgtagagaatcagacagccatg
gaactagaggagcaagtcactctgacatgtgaagcctccggagaccccattccttccatc
acctggagaacgtccacccgaaacatcagcagtgaagaaaaggcatcgtggactcgacca
gagaagcaagagactctagatgggcacatggtggtacgcagccatgctcgtgtgtcctcc
ctgaccctgaagagcatccagtacacagatgctggagaatacatctgcactgccagcaac
accatcggccaggactcccagtccatgtaccttgaagttcaatatgctcccaagctccag
ggccctgtagctgtgtacacttgggaagggaaccaggtgaacatcacctgtgaggtcttt
gcctacccaagtgccacaatctcctggttccgagatggccagttgctgccaagctccaac
tacagcaatatcaagatctacaacaccccatctgcgagctatctggaggtaacccctgat
tccgaaaatgactttggaaactacaactgcacagcggtgaaccgtattggacaggagtcc
ttggaattcatcctggttcaagcagatacaccatcttccccatccatcgaccgggtggaa
ccatactccagcacagcacaggtacaatttgatgagccagaagccacaggtggagttccc
atcctcaaatacaaggctgagtggaagtcgctgggtgaagaagcatggcattccaagtgg
tatgatgccaaagaagccaacatggaagggattgtcaccatcatgggcctgaagcctgag
acaaggtacgcggtacgactggcggccctcaacggcaaggggctgggcgagatcagtgca
gccactgagttcaagacacagccagtccgggaacccagcgcacccaagctggaagggcag
atgggagaggacgggaactccatcaaggtgaacctgatcaagcaggatgacggcggctcc
cccatcagacactatctggtcaagtacagagcgctcgcctccgagtggaaaccagagatc
aggctcccgtccggcagtgaccacgtcatgctcaagtccctagactggaacgccgagtac
gaagtatatgtggtagctgagaaccagcaaggaaaatccaaggcagctcacttcgtgttc
aggacttcagcccagcccacggccatcccagccaatggcagccccactgcaggcctgagc
acaggcgccattgtgggcatcctcattgtcattttcgtcctactcctggtggtcatggac
atcacctgctacttcctgaacaagtgtggcctgctcatgtgcatcgctgttaacctgtgc
ggcaaagcggggcccggagccaagggcaaagacatggaggagggcaaggctgctttctcg
aaagatgagtctaaagaacccattgtagaggtccgaacggaggaggaacggactccaaac
catgacggagggaagcacacagagcccaacgagaccacaccactgacagagcccgagaag
ggtcctgtagaaacaaagtccgagccccaggagtcagaagcaaagccagcgccaactgaa
gtcaagacggtccccaatgaagccacacaaacgaaagagaatgagagcaaagcatga
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