Rattus norvegicus (rat): 246136
Help
Entry
246136 CDS
T01003
Symbol
Man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
246136 (Man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
246136 (Man2c1)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
246136 (Man2c1)
Membrane trafficking [BR:
rno04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
246136 (Man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
246136
NCBI-ProteinID:
NP_640349
RGD:
628787
Ensembl:
ENSRNOG00000030654
UniProt:
P21139
Q5M9I2
LinkDB
All DBs
Position
8:66434480..66445649
Genome browser
AA seq
1039 aa
AA seq
DB search
MAAAPFLKHWRTTFERVEKFVSPIYFTDCNLRGRLFGDSCPVTLSSFLTPERLPYEKAVQ
QNFSPAQVGDSFGPTWWTCWFRVELVIPEVWVGKEVHLCWESDGESLVWRDGEPVQGLTK
EGEKTSYVLSERLHAADPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSQAKLAVF
HRDVHNLLVDLELLLGVAKGLGEDNQRSFQALYTANQMVNICDPAQPETYPAAEALASKF
FGQRGGESQHTIHATGHCHIDTAWLWPFKETVRKCARSWSTAVKLMERNTEFTFACSQAQ
QLEWVKNQYPGLYAQLQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEF
GKMCSEFWLPDTFGYSAQLPQIMQGCGIKRFLTQKLSWNLVNSFPHHTFFWEGLDGSQVL
VHFPPGDSYGMQGSVEEVLKTVTNNRDKGRTNHSGFLFGFGDGGGGPTQTMLDRLKRLGN
TDGLPRVQLSSPGQLFTALERDSGQLCTWVGELFLELHNGTYTTHAQLKKGNRECEQILH
DVELLSSLALARSAQFLYPAVQLQRLWRLLLLNQFHDVVTGSCIQLVAEDAMNYYEDIRS
HGNTLLSAAAAALCAGEPGPKGLLIINTLPWKRTEVLALPKPCGAHSLALVTVPSIGYAP
APTPTSLQPLLPQQPVFVMQETDGSVTLDNGIIRVRLDPTGCLTSLVLVASGREAIAEGA
LGNQFVLFDDVPLYWDAWDVMDYHLETRKPVRGQAGTLAVGAEGGLRGSAWFLLQISPNS
RLSQEVVLDVGCPYVRFHTEVHWHETHKFLKVEFPARVRSPQATYEIQFGHLQRPTHNNT
SWDWARYEVWAHRWIDLSECDFGLALLNNCKYGTSVRGNVLSLSLLRAPKAPDVTADMGR
HEFTYALMPHKGSFQEAGVIQAAYNLNFPLLALPAPGPAPDTTWSAFSVSSPAVVLETIK
QAEKSHQHRTLVLRLYEAHGSHVDCWLHTSLPVQEATLCDLLEQRDPTGHLSLQDNRLKL
TFSPFQVRSLLLVLQPPAN
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgccgttcttgaagcactggcgcaccacttttgagcgggtggagaagttc
gtgtccccgatctacttcaccgactgtaaccttcgcggcaggctcttcggggacagctgc
ccggtgacactctccagcttcctgacgccggaaaggcttccctatgagaaggcagtgcag
cagaacttcagccctgcgcaggtcggcgacagcttcggacccacatggtggacctgctgg
tttcgggtagaactggtcatccctgaagtttgggtgggcaaggaagttcatctttgctgg
gaaagtgatggagaaagccttgtctggcgtgatggggaacctgtccagggtttgaccaag
gagggtgaaaagactagttatgtcctgagtgagaggctgcacgcagcagatcctcggagc
ttgactctctatgtggaagtagcctgcaatgggcttctgggagccgggaagggaagcatg
atcgcagcccctgaccctgagaagatgttccagctgagccaggctaagctggctgtgttc
caccgggatgtccacaatctcctggtggacctggagctgttgctgggtgtggccaagggc
ctcggggaggacaaccagcgcagcttccaggccctgtacacagccaaccagatggtgaac
atatgtgaccctgcgcagcctgagacttacccagcagccgaggccctggcctccaagttc
tttggccaacgtggaggtgaaagccagcataccatccatgcaacaggacactgtcacatt
gatacagcctggctttggcccttcaaggagactgtgaggaaatgtgcccggagctggtca
acagctgtgaagctcatggagcggaacactgagttcacctttgcctgctctcaggcacaa
cagctcgagtgggtaaagaaccaataccctggtctgtatgcccagctccaggagtttgcc
tgccgaggacagtttgtgcctgtggggggcacctgggtagaaatggatgggaaccttccc
agtggagaggccatggtgaggcagttcctacagggccagaacttctttctgcaagagttt
ggaaagatgtgctctgagttctggctgccagatacatttggctactcagcacagctcccc
cagatcatgcaaggctgtggcatcaaacgcttcctgacacagaaactgagctggaacttg
gtcaactccttcccacaccataccttcttctgggaggggctggatggctcccaagtgctg
gtacacttcccccctggagactcatatggaatgcagggcagtgtggaagaggtgctgaag
actgtgaccaacaaccgggacaagggacggaccaaccacagtggcttcctctttggcttc
ggggatgggggtggtggccccacacagaccatgttggaccgattgaagcggctgggcaac
actgatgggctgcccagggtgcagctgtcttctcctggacagctcttcacagcactggag
agagactcagggcagctgtgcacatgggttggggaactcttcttggagctgcacaatggc
acctatactacccatgcccagctcaagaaggggaaccgagaatgtgagcagattcttcat
gacgtggagctgctcagcagccttgccctagcccgaagtgcccagttcctgtacccggca
gtccagctgcagcgcctctggaggctcctactcctcaaccagttccatgatgtggtgact
ggaagctgcattcagctggtggcagaagatgccatgaactactatgaagacatccgttct
catggcaatacgctgctcagtgctgcagccgcagccttgtgtgctggggagccaggtccc
aagggcctcctcattatcaacacactgccctggaagcgcacagaagtgttggcactaccc
aagccttgtggggctcacagcctagccctggtgacagtgcccagtattggctatgctcct
gctcccacccctacttcactgcagcccctcctaccccagcagcccgtgtttgtgatgcag
gagactgacggttccgtgacgctggacaatggcatcatccgggtgagactggatccaact
ggctgtcttacttccctggtcctggtggcttctggcagggaagccattgctgagggtgcc
ctggggaaccagtttgtgctgtttgatgatgtgccactgtactgggatgcatgggacgtc
atggactaccatctagagacacggaagcctgtgcggggccaggcaggtaccctggcagta
ggcgctgaaggtggccttcggggtagtgcctggttcctgctacagatcagccccaacagt
cggctcagccaggaagtcgtgctggatgttggttgcccctatgtccgcttccacacggag
gtgcactggcacgagacccacaagttcctgaaggtggagttccccgctcgagtacggagc
ccccaggctacctatgagatccagtttgggcaccttcagaggccgacccacaacaacacc
tcctgggactgggctcgctatgaggtgtgggctcatcgctggatagatctgtccgagtgt
gactttgggctggccctgctcaacaactgcaagtatggaacgtcagtacgaggcaacgtc
ctcagcctctcactgctgcgtgcacccaaggctccagatgttactgctgacatggggcgc
catgaattcacttatgccttgatgccacacaagggttctttccaagaagctggtgttatc
caggctgcctacaacctcaactttcccctcttggcactgccagctccaggcccagcccct
gataccacctggagcgccttttccgtgtcttcaccagcagtcgtgttggagaccatcaag
caggccgagaagagccatcagcaccgcacactggttctaaggctgtatgaggctcatggc
agccatgtggactgctggctacacacatcattgcctgttcaggaggccaccctttgtgac
ctcctggagcagcgagaccctaccggtcacctgtcccttcaggacaaccgcctgaagctc
accttttctccctttcaagtgaggtccttattgctcgtgcttcagcctccagcaaactga
DBGET
integrated database retrieval system