Rattus norvegicus (rat): 246214
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Entry
246214 CDS
T01003
Symbol
Lrit1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 precursor
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
246214 (Lrit1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
246214 (Lrit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
LRR_1
Ig_2
LRRNT
LRR_EndoS
IlvGEDA_leader
LRR_14
Motif
Other DBs
NCBI-GeneID:
246214
NCBI-ProteinID:
NP_647547
RGD:
628607
Ensembl:
ENSRNOG00000012790
UniProt:
Q9JMH2
A6K9I9
LinkDB
All DBs
Position
16:12842339..12850266
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AA seq
623 aa
AA seq
DB search
MWVALGMLWLLALGGPHQAWSFCPSQCSCSLHILSDGSKARTVVCSDPDLTLPPASIPPD
TCKLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLV
TFPWAALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDTWAH
LKTGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAG
VAFSQLELRKCQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGTVH
QEVSSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVTEPQTSTEYTGIPGA
LWARTGEGAEAAAYNNKLVARHVPHVPEPVALATKPSVPSIKEELPLQNFQMDVPGEFSR
EPSEHQETQMVRSLKVVGDTYHSVSLVWKAPQAGNTTAFSVLYAVFGQRDMRRMTVEAGK
TSVTIEGLAPKTKYVACVCVRGLVPTKEQCVIFSTDEVVDAEGTQRLINMVVISVAAIIA
LPPTLLVCCGALRRRCHKCRAGGSAEASGAYVNLERLGHSEDGSEELSRSSLSEADRLLS
ARSSLDSQVLGVRGGRRINEYFC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtggccctgggcatgctctggctccttgcacttgggggacctcaccaggcctgg
agcttctgtccttctcaatgcagctgcagcctgcacatcctgagtgacggcagcaaggcc
aggacagtggtgtgcagcgaccctgacttgactctgcccccagcttcgattcctccggac
acctgcaagctgcgcctagagcgaaccgccattcgcagggtgcccggagagaccttcagg
cctctcagccgcctggagcagctgtggctaccctacaatgctctcagtgagcttagtacc
ctcatgctcaggggtctgcgacgtctacgagagctgcggctgcctgggaaccacctggtc
actttcccctgggctgcactcaaggacactccacagctgcaactactggacctgcaggcc
aatcgcctctcgaccttgccacccgaggctgtacacttcctggaaaaccttactttcctg
gacctctccaataaccagctgatgaggcttcctgaggagctactggatacgtgggctcac
ctgaagaccggaccctatctttccagccgtcgtaccaggctagtcttagggcttcaggac
aacccctgggtgtgtgactgtcggctctatgacttagttcatctcctagatggctgggct
tccaacttgatcttcatcgaggctagactgaggtgtggcagcccacgcagcctggctgga
gtggccttcagccagctggagctaagaaagtgtcagagcccagagctccgtccaggggtg
accagcatcatatctcctttgggtagcacagtgttgctacgttgtggagcaactgggatc
ccaggacctgagatgagctggaggagagccaatggacgaccactcaatggcacagttcac
caggaagtctccagtgatggctcaagttggactttgctggatctgcctgttgtgtctctc
tttgactctggggactacatctgccaagccaagaactttctgggagcttctgaaactctt
atctccttgattgtcactgagccacagacttctacagaatatactgggattccaggggcc
ctatgggcaaggacaggggaaggggcagaagctgctgcttacaacaacaagctagtggcc
aggcatgttcctcatgttcctgagcctgtagccctggctaccaagccctcagtgcccagc
ataaaggaggagctgcctctccagaactttcagatggatgtcccaggggagttctccaga
gagccatcagaacaccaggagacacagatggtcaggtctctcaaggtggtaggagatact
taccacagtgtgtctttggtgtggaaggcccctcaagctgggaacacaactgcctttagt
gtcctttatgcagtctttgggcagcgagacatgcgaaggatgactgtggaggccgggaag
acgagtgttactattgaggggcttgccccaaagaccaagtacgtggcatgtgtctgtgtg
cggggcctggtgcctacgaaggaacagtgtgtcatcttctctactgatgaggtggtagat
gcagagggcacccagcgactcatcaacatggtggtcatcagtgtggcggccatcatcgcg
ctgcctcccactctgctggtttgctgcggggctctccgaagacgctgccacaagtgccgc
gctgggggctctgcagaggcatccggggcctatgttaatttggaaagactaggccacagt
gaagatggctcagaggagctgtccaggagcagcctcagtgaagcagataggcttctctca
gcacgttccagcctggactcccaggtcttgggtgtcaggggcggcagacgcatcaatgag
tacttctgctga
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integrated database retrieval system
