Rattus norvegicus (rat): 24942
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Entry
24942 CDS
T01003
Symbol
Chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rno01006
]
24942 (Chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
24942 (Chm)
Prenyltransferases [BR:
rno01006
]
Protein prenylation
Rab geranylgeranyltransferase
24942 (Chm)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
24942 (Chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
24942 (Chm)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
24942
NCBI-ProteinID:
NP_058763
RGD:
2340
Ensembl:
ENSRNOG00000000161
UniProt:
P37727
Structure
PDB
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All DBs
Position
X:complement(82395463..82554249)
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AA seq
650 aa
AA seq
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MADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK
EYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQK
NHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGK
KENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSQLLYSRGLLI
DLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCV
EYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQ
CLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF
GQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPG
SFGVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEK
PRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNED
FCPAPPNPEDIVLDGDSSQQEVPESSVTPETNSETPKESTVLGNPEEPSE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatctcccttcggactttgatgtgatcgtaatagggacgggtttgcctgaa
tccatcattgcagctgcatgttcaaggagtggccagagggttctgcatgttgattcaaga
agctactatggaggaaactgggccagtttcagcttttcaggactgttgtcctggctaaag
gaataccaggaaaataatgatgttgtgactgaaaattcaatgtggcaagaacagatactt
gaaaacgaagaagctattcctcttagtagcaaggacaaaacaattcaacatgtagaagta
ttttgttatgccagtcaggatttgcacaaagatgttgaagaagctggtgcactgcagaaa
aatcatgcttctgtgacatctgcacagtccgcagaggctgccgaggctgcagaaacttct
tgccttcctactgcagtggagccattaagcatggggagctgtgaaatacctgcagaacaa
agccagtgccctggtccagagagttcaccagaagtcaatgatgctgaagccacaggaaag
aaagaaaatagtgatgctaaaagttcaacagaagaaccaagtgaaaatgtgcctaaagtc
caagacaacacagagacaccaaagaaaaacagaatcacttactcacagattattaaagaa
ggcagaagatttaacattgatttagtttcacaacttctgtattctcggggattactaatt
gatcttctaatcaaatcaaatgttagtcgatatgcagagtttaaaaatattacgaggatt
cttgcatttcgagaaggaactgtggaacaggttccatgttccagagcagatgtcttcaat
agcaaacaacttactatggtagaaaagcgaatgcttatgaaatttcttacgttttgtgta
gaatatgaagaacatcctgacgagtacagagcatatgagggaactacattttctgaatat
ttaaaaactcaaaaattaacccctaacctacaatattttgtcctgcactcaattgcaatg
acatcagagacaacaagctgtactgtagatggtctcaaagctactaaaaagtttcttcag
tgtcttgggcgatatggcaacactccatttctgtttcctttatatggccaaggagaactt
ccacagtgtttttgcagaatgtgtgctgtatttggtggaatctattgtcttcgccattct
gtacagtgccttgtagtggacaaagaatccagaaaatgtaaagcagtgatagatcagttt
ggtcaaaggataatctctaaacatttcattattgaagacagttacctttctgagaataca
tgttcccgtgtgcaatacaggcaaatatccagggcagtactgattacagatggatctgta
ctaaaaacggatgcagaccaacaggtctccattttggcggtgccagcagaagagccagga
agttttggtgtacgagttattgagttatgctcttcaacaatgacatgcatgaaaggcaca
tatttggtgcatttgacttgcatgtcttctaaaacagcaagagaagatttagaacgggta
gtccagaaattgtttactccgtatacagaaatagaagcagaaaatgaacaggttgaaaag
ccaagacttctatgggcactctacttcaatatgagagactcttcagatatcagcagagat
tgttataatgatttaccatccaatgtctatgtgtgctctggccctgactccggtctagga
aatgataatgcagtcaaacaggcggaaacacttttccagcaaatctgcccaaatgaagac
ttctgtccagccccgccaaatcctgaagatattgttcttgatggagacagctcccaacaa
gaagttccagaatccagtgtcacacccgaaaccaactcagagactcccaaggaaagtaca
gtcctgggaaacccagaagagccttctgaatag
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