Rattus norvegicus (rat): 24949
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Entry
24949 CDS
T01003
Symbol
Syn1
Name
(RefSeq) synapsin-1 isoform a
KO
K19941
synapsin
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
24949 (Syn1)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
24949 (Syn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
24949
NCBI-ProteinID:
NP_062006
RGD:
3797
Ensembl:
ENSRNOG00000010365
UniProt:
P09951
A6JZQ9
Structure
PDB
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All DBs
Position
X:3725745..3780940
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AA seq
704 aa
AA seq
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MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPSAASPGATPGSAAASAERASTAAPV
ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAAARVLLVID
EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVVRSLKP
DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMTQALPR
QRDASPGRGSHSQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQ
QRPPPQGQQHLSGLGPPAGSPLPQRLPSPTAAPQQSASQATPMTQGQGRQSRPVAGGPGA
PPAARPPASPSPQRQAGPPQATRQASISGPAPPKVSGASPGGQQRQGPPQKPPGPAGPIR
QASQAGPGPRTGPPTTQQPRPSGPGPAGRPTKPQLAQKPSQDVPPPIIAAAGGPPHPQLN
KSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctgcggcgccgcctgtcggacagcaacttcatggccaatctgcctaatggg
tatatgacagacctgcagcgcccgcaaccacctccgccgccgccctcagccgccagccct
ggggccactcccggatccgctgctgcctctgccgagagggcctccacagctgctccagtg
gcctctccagcagcccctagtcccgggtcctcggggggcggtggcttcttctcctcgctg
tctaacgcggtcaaacagaccacagcagctgcagccgccaccttcagtgagcaggtgggc
ggtggctctgggggcgcaggccgcgggggcgccgccgccagggtgctgctggtcatcgac
gagccgcacaccgactgggcaaaatacttcaaagggaagaagatccatggagaaattgac
attaaagtagagcaagctgaattctccgatctcaatcttgtggctcatgccaatggtgga
ttctccgtggacatggaagttcttcggaatggggtcaaagttgtgaggtctctgaagcca
gactttgtgctgatccgccagcatgccttcagcatggcacgtaatggagactaccgcagt
ttggtcattgggctgcagtatgctgggatccccagtgttaactctttgcattctgtctac
aacttttgtgacaaaccctgggtgtttgcccagatggttcgactacacaagaagcttgga
acagaggaattccctctgattgatcagactttctatcccaatcataaagagatgctcagc
agcacaacataccctgtagttgtgaagatgggccacgcacactctgggatgggcaaggtc
aaggtagacaaccaacatgacttccaggatattgcaagtgttgtggcactgactaagaca
tatgccactgctgagcccttcattgatgctaaatacgatgtgcgtgtccagaagattggg
cagaactacaaggcctacatgaggacatcagtgtcagggaactggaagaccaatacaggc
tctgctatgcttgagcagattgctatgtctgacaggtacaagttgtgggtagacacgtgc
tcagagatttttgggggacttgacatctgcgcagtggaagcactgcatggcaaggacgga
agggatcacattattgaggtggtgggctcctccatgccactcattggggatcaccaggat
gaagacaagcagctcatcgtggaacttgtggtcaacaagatgactcaggctctgcctcgg
cagcgggatgcttcccctggcaggggttcccacagccagactccatccccaggagccctg
cccttgggccgccagacctcccagcagcctgcaggacctcctgctcaacaacgaccccca
ccccagggaggccctccacaaccaggcccaggacctcagcgccagggacccccgctgcaa
cagcgcccacccccacaaggccagcaacatctttctggccttggacccccagctggcagc
cctctgccccagcgcctaccaagtcccacagcagcacctcagcagtccgcctctcaggcc
acaccaatgacccagggtcaaggccgccagtcacggccagtggcaggaggccccggagca
cctccagcagcccgcccgccggcctccccatctccacagcgtcaggcagggcccccacag
gctacccgtcaggcatctatctctggtccagctccaccgaaggtctcaggagcctcaccc
ggagggcagcagcgccaaggccctccccagaaacccccaggccctgctggtcccattcgt
caggccagccaggcaggtcccggacctcgcactgggccacccaccacacagcagccccgg
cccagcggcccaggtcctgctggacgtcccaccaaaccacagctggctcagaaacccagc
caggatgtgccaccacccatcattgctgctgccgggggacccccgcacccccagctcaac
aaatcccagtctctgaccaatgccttcaaccttccagagccagccccgcccaggcccagc
cttagccaggatgaggtgaaagctgagaccatccgcagcctgaggaagtctttcgccagc
ctcttctccgactga
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