Rattus norvegicus (rat): 25017
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Entry
25017 CDS
T01003
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
25017 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
25017 (Myo5a)
04131 Membrane trafficking [BR:
rno04131
]
25017 (Myo5a)
03029 Mitochondrial biogenesis [BR:
rno03029
]
25017 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
25017 (Myo5a)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
25017 (Myo5a)
mRNA cycle factors
P-body specific factors
25017 (Myo5a)
Membrane trafficking [BR:
rno04131
]
Others
Actin-binding proteins
Myosins
25017 (Myo5a)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
25017 (Myo5a)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
25017 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_16
Myosin_N
AAA_22
DUF5382
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
25017
NCBI-ProteinID:
NP_071514
RGD:
3143
Ensembl:
ENSRNOG00000058866
UniProt:
Q9QYF3
LinkDB
All DBs
Position
8:84692524..84860564
Genome browser
AA seq
1828 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTSELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPMIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHEPLIIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVGHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLTRVPVKPTKGRPGQTAKEHKKTVGLQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCQNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRKYKIRRAA
TIVLQSYLRGYLARNRYRKILREHKAVIIQKRVRGWLARTHYKRTMKAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADKYKQET
EQLVSNLKEENTLLKQEKETLNHLMVEQAKEMTETMERKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDIAPRT
EEPTEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVLRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTAVSEELD
VRKEEVLILRSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNR
LLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITR
LTNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIP
RKEKDFQGMLEYKREDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQ
KVRSLLTSTINSIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNE
HCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLR
KRTSSIADEGTYTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLR
KDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAI
CSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQVRLRDRKDSPQLLMDAKHIFPV
TFPFNPSSLALETIQIPASLGLGFIARV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacaccaagtttgcccgggtttggatacctgatcctgaggaa
gtgtggaaatcagctgagttgctcaaggactataaacctggagataaggtgctcctgctt
caccttgaggaagggaaggatttggaataccgtctagatccaaagaccagcgagctccct
cacctacggaaccctgacatacttgttggagaaaatgacctcacagccctcagctacctt
cacgagcctgctgtgctgcacaatctccgcgtccgcttcatcgactccaaactcatttat
acgtattgtgggatagtcctggtagctataaatccctatgagcagctgcctatctatgga
gaagatatcattaatgcatacagtggccagaacatgggtgacatggaccctcacatcttt
gcagtagctgaagaggcctataaacaaatggcaagggacgaacgaaatcagtccatcatt
gtaagtggagagtcaggtgcagggaagacagtctcggctaagtatgccatgaggtacttc
gcaactgtaagtggctctgccagtgaggccaatgttgaggaaaaggtcttggcctccaac
cccatcatggagtcaattggaaatgctaaaacaaccaggaatgataatagcagccggttt
gggaaatatattgaaattggttttgacaagagatatcgaatcatcggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaggagagaaactaccat
atcttctatcagctctgtgcttcggcaaagctacctgagtttaagatgctgcggttagga
aatgcagatagtttccattacacgaagcaaggaggcagccctatgatagaaggagtggac
gatgcgaaggagatggcacacaccaggcaggcctgcactctgctgggaattagtgaatct
taccaaatgggaatttttcggatacttgctggcattcttcacttaggcaatgttgggttt
gcgtctcgagattcagacagctgcacaatacctcccaagcacgagcctcttatcattttc
tgtgatcttatgggtgtggattatgaagagatgtgtcactggctctgccaccgaaagcta
gctaccgccacagagacgtacatcaagcccatctccaagctgcaggccacaaatgcccga
gacgctttagcaaagcatatctatgcaaagctctttaactggattgtcggccatgtcaat
caggctctccattcagctgtcaagcagcactctttcatcggcgtgctggacatttatgga
tttgaaacatttgagataaatagttttgaacagttctgcataaattatgcaaatgaaaag
ctacagcaacaattcaacatgcatgtcttcaaactggaacaggaggagtacatgaaggaa
caaattccatggacactcatagatttctatgataatcagccttgtatcaatcttatagaa
tctaaactgggtattctagatttgctggatgaggaatgtaagatgcctaaaggtaccgat
gacacatgggcccaaaaactatacaacacacatttgaacaaatgtgctctctttgagaag
ccccgcatgtcaaacaaagctttcatcatcaaacattttgctgacaaagtggagtaccag
tgtgaaggttttcttgaaaagaataaagacactgtttttgaagaacaaattaaagtcctt
aagtcaagcaagtttaagatgctaccagaactatttcaagatgacgagaaggccatcagt
cccacctctgccacttcctcaggacgcacacctctcacacgggtacctgtaaagcccacc
aagggtcgacctggccagactgccaaagagcacaagaagacagtgggacttcagtttcga
aactcccttcacctgcttatggaaacccttaacgccactactcctcactatgttcgctgt
attaagcccaatgatttcaagtttccattcacatttgatgagaagagagcagtacagcag
ctaagagcatgtggtgtcctggagaccatccggatcagcgcagcagggtttccctcaagg
tggacttatcaagagtttttcagccggtaccgggtcctaatgaagcaaaaggatgtgctg
ggagatagaaagcaaacatgccagaatgtattagagaaactgatactggacaaggataaa
taccagtttggtaagacaaagatcttttttcgtgctggtcaagtggcctatctagaaaaa
ttgagggctgacaaactgagggcggcctgcatccggatccagaagacgattcgtgggtgg
ctgctgaggaagagatacctgtgtatgcagagggcagccatcacagtgcagcgatacgtg
cgtggctatcaggctcgatgctatgctaagtttctgcgcagaaccaaggcagcaaccacc
attcagaagtactggcgcatgtatgtggtccgcaggaagtacaagattagacgagctgcc
accattgttcttcagtcttatttgagaggctacttggcaagaaataggtatcgcaagata
ctccgtgagcacaaagcagtcatcattcagaaacgtgtccgtggctggctggctcgtaca
cattataagaggaccatgaaagccatcatctaccttcaatgctgcttccggcggatgatg
gccaagcgtgagctgaagaaactcaaaattgaggctcgctctgtggaacgctacaagaag
ctccatattggcatggaaaacaagattatgcagctgcaacgcaaagtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctagaaggagtatacaactctgag
actgaaaaactacgaaatgatgtagaacgtcttcagctaagcgaggaggaagctaaggtt
gccactgggagagtgcttagtctgcaggaagaaattgcaaaactccgaaaagacctggaa
caaactcgatcggagaaaaagtccattgaagaacgagcagataaatacaaacaagaaact
gagcagctggtgtcaaacttgaaggaagaaaacactctgctgaagcaggaaaaggagacc
ctcaatcacctcatggtggagcaggctaaggagatgacagaaactatggagaggaagtta
gtagaagaaacaaaacaactggagctcgacctgaatgatgagaggctgaggtatcagaac
ctcctgaatgagttcagtcgtctggaggagcgctatgacgacctcaaggaagagatgacc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctacccacagcagcaat
gagtctgaatacaccttcagctcagaatttgcagaaactgaagacattgcaccaaggaca
gaggagccaactgagaagaaggtgcctctggatatgtcattgttccttaagctccagaag
cgtgtcacagagctggaacaggagaagcagttgatgcaggatgagctggaccgaaaggag
gagcaggtgttgcgcagcaaggcaaaggaagaagaaagaccacagattagaggtgctgaa
ctggaatatgagtccctcaagcgtcaggaactggagtcagaaaacaaaaagctgaagaat
gagctgaatgagctacgcaaagccctgagtgagaagagtgcccccgaagtgactgcgcca
ggcgcgcccgcttaccgcgtcctcatggagcagctgacggccgtgagcgaggagctcgat
gtccgcaaggaggaagtcctcatcttaaggtctcagctggtgagccagaaagaagccatc
caacccaaggatgacaagaatacaatgacagattccacaatacttttggaagatgtacag
aaaatgaaagacaaaggtgaaatagcacaagcatatattggtttgaaagaaacgaacagg
ctcttagaatcccagctacagtcgcagaagaggagccatgaaaatgaggctgaggccctc
cgtggggagatccagagcctaaaggaagaaaacaaccggcaacagcagctgctggcccag
aacctgcagctgccccctgaggcccgcattgaggccagcctgcagcatgagatcacccgg
ctgaccaatgaaaacctggatctgatggaacaacttgaaaagcaggataaaaccgtccgg
aaactgaagaaacaactaaaagtctttgccaaaaaaatcggtgaactagaagtggggcag
atggagaacatatccccaggacagatcatcgatgagcctatccggccggtcaacattccc
cggaaagaaaaggatttccaagggatgctggagtacaagcgggaggacgaacagaagctt
gttaagaacctgattctagaactaaagccacgtggtgtggctgtcaatctgattccaggg
ttaccggcatatatcttgtttatgtgtgtgcgacatgccgactacctgaacgatgatcag
aaagtaagatcattgctgacatcaacaattaacagcatcaaaaaagtcctgaagaaaaga
ggtgacgattttgaaactgtctccttctggctctctaacacatgtcgatttttgcactgt
ttgaagcaatatagtggagaagagggcttcatgaaacacaacacgtctcgccagaatgaa
cactgcctcaccaattttgaccttgctgagtatcggcaagtactgagtgacttggccatt
cagatctatcagcagcttgtgagggtgttagagaacattcttcagccaatgatagtctca
ggcatgctagagcatgaaacaattcagggagtatctggggtgaagcccacaggactcaga
aagcgaacctccagtatcgccgatgagggcacctacacactggactccatcctgcggcag
ctcaactccttccattccgtcatgtgtcagcatggcatggacccagagctaatcaagcag
gtggtcaagcagatgttctacatcgtgggcgccatcaccctgaacaacctcctgctgcgc
aaggacatgtgctcctggagcaaaggcatgcagatacggtacaatgtcagtcaattggaa
gaatggctacgtgacaagaatctaatgaacagtggggcaaaagagactctggaacctctt
atccaggctgctcagcttttgcaagtgaaaaagaaaactgacgatgacgcggaagccatc
tgctccatgtgcaacgctctgaccacagcccagatcgtcaaagtgttgaatctgtacaca
cccgttaatgagtttgaggaaagggtctctgtttcatttatccgcactatacaggtgcgg
ttacgagacaggaaagactctccacagctgctcatggatgcaaaacacatctttcctgtc
actttcccctttaacccatcctccctggccctagaaaccatccagattccagccagcctg
ggcctgggcttcattgcaagggtctga
DBGET
integrated database retrieval system
