Rattus norvegicus (rat): 25049 Help Entry 25049             CDS       T01003                                  Symbol Atxn1 Name (RefSeq) ataxin-1   KO K23616   ataxin-1 Organism rno  Rattus norvegicus (rat) Pathway rno04330   Notch signaling pathway rno05017   Spinocerebellar ataxia rno05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:rno00001]  09130 Environmental Information Processing   09132 Signal transduction    04330 Notch signaling pathway     25049 (Atxn1)  09160 Human Diseases   09164 Neurodegenerative disease    05017 Spinocerebellar ataxia     25049 (Atxn1)    05022 Pathways of neurodegeneration - multiple diseases     25049 (Atxn1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ATXN-1_C AXH Motif Other DBs NCBI-GeneID:  25049 NCBI-ProteinID:  NP_036858 RGD:  3624 Ensembl:  ENSRNOG00000016998 UniProt:  Q63540 A6J718 LinkDB All DBs Position 17:18943397..19354751 Genome browser AA seq 789 aa AA seqDB search MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGSRGHGGGRH GPAGTSGEHGLQGMGLHKALSAGLDYSPPSAPRSVPTANTLPTVYPPPQSGTPVSPVQYA HLSHTFQFIGSSQYSGPYAGFIPSQLISPPGNPVTSAVASAAGATTPSQRSQLEAYSTLL ANMGSLSQAPGHKVEPPPQQHLGRAAGLVNPGSPPPTQQNQYIHISSSPQSSGRATSPPI PVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVLNG EMEKSRRYGASSSVELSLGKTSSKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMVLP NSSTPSADLETQQATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPV GLPATAFYAGAQPPVIGYLSSQQQAITYAGGLPQHLVIPGTQPLLIPVGSPDMDTPGAAS AIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPAAA SPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGV AVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLT LKNLKNGSVKKGQPVDPASALLKHAKTDSLAGSRHRYAEQENGINQGSAQVLSENGELKF PEKIGLPAAPFLTKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKIC IEGRSNVGK NT seq 2370 nt NT seq  +upstreamnt  +downstreamnt atgaaatctaaccaagagcggagcaatgaatgcctgcctcccaagaaacgtgagatcccc gccaccagtcggccctccgaggagaaggccactgctctgcccagcgacaaccactgcgtg gagggtgtggcatggctccccagcacccctggcagccgcggccacgggggtgggcggcac gggccagcagggacttccggggaacatggtttacaaggaatgggtttacataaagcactg tccgcagggctggattactccccacccagtgcccccaggtcggtccccacagccaacacg ctgcccaccgtgtaccctcctcctcagtcagggacgccggtgtctcctgtgcagtacgcc cacctatcacataccttccagttcattgggtcctcccagtatagtgggccttacgcgggc tttatcccttcccagctgatctccccaccaggcaacccagtcaccagtgcggtggcctcg gctgcaggggccaccactccatcacagcgctcccagctggaggcatattccaccctgctg gccaacatgggcagtctgagccaggcaccaggacacaaggttgagccccctccgcagcag cacctcggcagggctgcgggattagtcaacccggggtcccctccacctacccagcagaac cagtacattcacatttccagctctccacagagctccgggcgggcaacatctccacccatc ccggtccacctccatccccatcagacgatgatcccgcacacgctcaccctggggccttca tcccaggtggtcgtgcaatacagtgacgccggaggccactttgttcctcgagagtccacc aaaaaagcagaaagcagcaggttgcagcaggctatgcaggccaaggaggtcctcaatggg gagatggagaaaagccggaggtatggggcgtcatcttctgtggagctgagcctggggaag acgagcagcaagtcagtgcctcacccctatgagtccaggcatgtggtggtccacccgagc ccagcagactacagcagtcgtgatacctccggggtccgtggatctgtgatggtcctgccc aacagcagcacaccctcagccgacctggagacacagcaggccacacatcgagaggcctcc ccatccaccctcaatgacaagagcggtttgcacctagggaagcccggccacaggtcctac gcgctgtccccacacacggtcattcagaccacacacagcgcatcagagcctctcccggtg ggcctaccagccacggccttctatgctggcgctcaacctcctgtcatcggctatctgagt agccagcagcaagcaatcacctatgctggtggtctgccccagcacctggtgatcccaggt acccagcccctgctcatcccagtgggcagccctgacatggacacacctggggcagcctcg gccatagtgacgtcatcgccccagtttgctgcagtacctcacacgtttgtcaccaccgcc ctgcccaagagcgagaacttcaacccagaggctctggtcacccaggcagcctacccagcc atggtgcaggcccagatccacctgccggtggtacagtccgtggcatcccctgccgcggca tcacccacgctgccgccatatttcatgaaaggctccatcatccagctggccaacggggag ctgaagaaggtagaggatctgaagacagaggatttcatccagagtgcagagattagcaat gacctcaagatcgactccagtactgtggagaggatcgaggacagccacagccccggtgtg gccgtgatacaatttgctgttggtgaacaccgagcccaggtcagtgtcgaagttttggta gagtatcctttttttgtatttggacagggctggtcatcctgctgtcccgagcggaccagc cagctctttgatctgccgtgttccaaactctccgttggggacgtctgcatctcgctcacc ctcaagaacctgaagaatggctctgttaaaaagggccagcccgtggaccctgccagtgcc ctgctgaagcacgcaaagaccgacagcctggctggcagcagacacagatacgccgagcag gaaaacggaatcaaccaggggagcgcccaggtgctctctgagaacggcgaactgaagttt ccagaaaaaattggattgcctgcagcacccttcctcaccaaaatagaaccgagcaagccc acagccacgaggaagaggaggtggtcggcgccggagacccgtaaactggagaagtcggag gacgagccacctttgactcttcccaagccttcgctcattcctcaggaggttaagatctgc atcgaaggccgatctaacgtgggcaagtag

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