Rattus norvegicus (rat): 25094
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Entry
25094 CDS
T01003
Symbol
Mitf
Name
(RefSeq) microphthalmia-associated transcription factor isoform 1
KO
K09455
microphthalmia-associated transcription factor
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04137
Mitophagy - animal
rno04380
Osteoclast differentiation
rno04916
Melanogenesis
rno05200
Pathways in cancer
rno05202
Transcriptional misregulation in cancer
rno05218
Melanoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
25094 (Mitf)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
25094 (Mitf)
09158 Development and regeneration
04380 Osteoclast differentiation
25094 (Mitf)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
25094 (Mitf)
05202 Transcriptional misregulation in cancer
25094 (Mitf)
09162 Cancer: specific types
05218 Melanoma
25094 (Mitf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
25094 (Mitf)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
25094 (Mitf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
DUF726
Motif
Other DBs
NCBI-GeneID:
25094
NCBI-ProteinID:
NP_001178018
RGD:
3092
Ensembl:
ENSRNOG00000008658
UniProt:
O88368
LinkDB
All DBs
Position
4:131965676..132177790
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AA seq
526 aa
AA seq
DB search
MQSESGIVADFEVGEEFHEEPKTYYELKSQPLKSSSSAEHSGASKPPLSSSTMTSRILLR
QQLMREQMQEQERREQQQKLQAAQFMQQRVAVSQTPAINVSVPTTLPSATQVPMEVLKVQ
THLENPTKYHIQQAQRHQVKQYLSTTLANKHAGQVLSPPCPNQPGDHAMPPVPGSSAPNS
PMAMLTLNSNCEKEAFYKFEEQSRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE
ILGLMDPALQMANTLPVSGNLIDLYSNQGLPPPGLTISNSCPANLPNIKRELTACIFPTE
SEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDY
IRKLQREQQRAKDLENRQKKLEHANRHLLLRVQELEMQARAHGLSLIPSTGLCSPDLVNR
IIKQEPVLENCSQELVQHQADLTCTTTLDLTDGTISFTNNLGTMPESSPAYSIPRKMASN
LEDILMDDALSPVGVTDPLLSSVSPGASKTSSRRSSMSAEETEHAC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgaatcgggaatcgtggcggatttcgaagtcggggaggagtttcacgaagaa
cccaaaacctattacgaactcaaaagtcaacctctgaagagcagcagttctgcagagcat
tctggggcctccaagcctccgttaagctcctccactatgacatcacgcatcttgctacgc
cagcaactcatgcgtgagcagatgcaggagcaggagcgcagggagcagcagcagaagctg
caggcagcccagttcatgcaacagagagtggccgtgagtcagacaccagccataaacgtc
agcgtgcccaccacccttccctctgccacccaggtgccgatggaagtcctcaaggtgcag
acccacctggaaaaccccaccaagtaccacatacagcaagcccagaggcaccaggtaaag
cagtacctttctaccactttagcaaacaaacatgccggccaagtcctgagcccgccatgt
ccaaaccagcctggcgaccatgccatgcctccagtgccggggagcagcgcacccaacagc
cccatggctatgctcactcttaactccaactgtgaaaaagaggcgttttataagtttgag
gagcagagcagggcagagagtgagtgcccaggtatgaacacgcactctcgagcttcgtgc
atgcagatggatgatgtgattgatgacatcatcagcctggaatcaagttataatgaagaa
attttgggcttgatggatccggccttgcaaatggcaaatacgttacctgtctctggaaac
ttgatcgacctatacagcaaccagggcctgccacccccaggccttaccatcagcaactct
tgtccagccaaccttcccaacataaaaagagagctcacagcgtgtattttccccacagag
tctgaagcaagagcattggctaaagagaggcagaaaaaggacaatcacaacttgattgaa
cggagaagaagatttaacataaatgaccgcattaaggaactaggtactttgattcccaag
tcaaacgatccggacatgcgttggaacaaggggaccatcctcaaggcctccgtggactac
atccgaaagttgcaacgggaacagcagcgagctaaggaccttgaaaaccggcagaagaag
ctggagcatgctaaccgccatctgctgctcagagtgcaggagctcgagatgcaggctaga
gcacatgggctttctcttatcccatccacgggtctctgctcgcctgatttggtgaatcgg
atcatcaagcaagaaccagttcttgagaactgcagccaggaacttgtacagcaccaggca
gacctgacatgcacaacgactctggatctcacggacggtaccatctcctttaccaacaac
ctcggcacaatgcctgagagcagcccggcctacagcatccccaggaagatggcctccaac
ttggaagacatcctgatggacgatgccctctcacctgtcggcgtcaccgacccactgctg
tcatcagtgtccccaggagcttcgaaaacaagcagccggaggagcagtatgagcgcagaa
gaaacggagcatgcgtgttag
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