Rattus norvegicus (rat): 25102
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Entry
25102 CDS
T01003
Symbol
Chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
25102 (Chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
25102 (Chrna5)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
25102 (Chrna5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
25102
NCBI-ProteinID:
NP_058774
RGD:
2347
Ensembl:
ENSRNOG00000013610
Vega:
OTTRNOG00000002261
UniProt:
A0A8J8XM73
A6J4N6
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All DBs
Position
8:64265879..64294233
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AA seq
467 aa
AA seq
DB search
MAVRGSRRRALRLLLMVQLLAGRWRPTGAARGTRGGLPELSSAAKHEDSLFRDLFEDYER
WVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKI
IRVPSDSLWIPDIVLFDNADGRFEGASTKTVVRYNGTVTWTQPANYKSSCTIDVTFFPFD
LQNCSMKFGSWTYDGSQVDIILEDQDVDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPYI
TYSFVIKRLPLFYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIE
EIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKL
PKLLCMRSHADRYFTQREEAESGAGPKSRNTLEAALDCIRYITRHVVKENDVREVVEDWK
FIAQVLDRMFLWTFLLVSIIGTLGLFVPVIYKWANIIVPVHIGNTIK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgggggtcgcggcggcgcgcgctgcgcctgctcttgatggtgcagctgctg
gcagggcgctggcggccgaccggggcggcgcggggcacgcggggagggttgcctgaacta
tcctctgctgccaaacatgaagacagcttgtttagggatttatttgaagactacgaaagg
tgggttcgccctgtggaacacctgagcgacaagataaaaatcaagtttggccttgcgata
tctcagttagtggacgtggatgagaaaaaccagctgatgacgacgaacgtctggttgaag
caggaatggatagatgtgaaattgagatggaatcctgacgattatggtgggataaagatt
atacgtgttccttcggactccctgtggatcccagacatcgttttgttcgataatgcagat
ggacgttttgaaggggccagcacgaaaacagttgtcaggtacaacggcactgtcacgtgg
acgcaaccagcaaactacaaaagttcttgcaccatcgacgttacctttttcccgtttgat
ctccaaaattgttccatgaaattcggctcgtggacatacgatggatcccaggttgatata
atcctagaggaccaagatgtcgacagaacagactttttcgacaatggagagtgggaaatc
atgagcgcgatggggagcaaggggaaccggacggacagctgctgctggtacccctacatc
acgtactcctttgtgattaagcggctgcctctcttctataccttgtttcttattatcccc
tgcattgggctctcatttctgactgtggttgtcttctatctcccttcaaacgagggtgaa
aagattagcctctgcacctcagtgctcgtctctctgactgtcttccttttggtaatcgaa
gagatcataccgtcatcttccaaagtcatacccctgattggggagtacttggtgttcacc
atgattttcgtgaccctatccattatggtgactgtctttgccatcaacatccaccaccgc
tcttcctccacacacaacgctatggcgccctgggttcgtaagatatttctccacaagctt
cccaagctgctctgcatgagaagtcatgcggataggtacttcactcagagagaagaagcc
gagagtggggctggacctaaatctcggaacactttggaagccgcactcgattgcattcgc
tacatcacgaggcacgtcgtgaaagagaacgacgtccgcgaggttgttgaagattggaaa
ttcatagcccaagtccttgatcggatgtttttgtggacgtttcttctggtgtcaatcatt
gggactttagggctttttgttcctgttatttataaatgggccaatataatagtcccagtt
cacattggaaacacaattaagtga
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