Rattus norvegicus (rat): 25133
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Entry
25133 CDS
T01003
Symbol
Pcdhb12
Name
(RefSeq) protocadherin-3 precursor
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
25133 (Pcdhb12)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
25133 (Pcdhb12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
25133
NCBI-ProteinID:
NP_775122
RGD:
3266
Ensembl:
ENSRNOG00000033719
UniProt:
Q63418
F1M8K9
A6J368
LinkDB
All DBs
Position
18:29413756..29416774
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AA seq
797 aa
AA seq
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METALAKIPQQRQVFFLTILSLLWKSSSEAIRYSMPEETESGYMVANLAKDLGIRVGELS
SRGAQIHYKGNKELLQLDAETGNLFLKEKLDRELLCGETEPCVLNFQIILENPMQFFQTE
LQLTDINDHSPEFPNKKMLLTIPESAHPGTVFPLKAAQDSDIGSNAVQNYTVNPNLHFHV
VTHSRTDGRKYPELVVDRALDREEQPELTLILTALDGGTPRRSGTTTVHIEVVDINDNSP
QFVQSLYKVQVPENNPLNAFVVTVSATDLDAGVYGNVTYSLFQGYGVFQPFVIDEITGEI
HLSKELDFEEISNHNIEIAATDGGGLSGKCTVAVQVLDVNDNAPELTIRKLTVLVPENSA
ETVVAVFSVSDSDSGDNGRMVCSIPNNIPFLLKPTFENYYTLVTEGPLDRENRAEYNITI
TVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPDDPQLALDSLISINVDNGQLFALRALDYEALQSFEFYVGATDGGSPAL
SSQTLVRMVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAQKHKLLLLVKDNGDPLRSANVTLHVL
VVDGFSQPYLPLAEVAQDSMQDNYDVLTLYLVIALASVSSLFLLSVVLFVGVRLCRRARE
ASLGDYSVPEGHFPSHLVDVSSAGTLSQSYQYEVCLNGGTRTNEFNFLKPLFPILPTQAA
AAEERENAVVHNSVGFY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcactagcaaaaataccacagcaaaggcaagtcttttttcttactatattg
tcgttattgtggaagtctagctctgaggccattagatattccatgccagaagaaacagag
agtggctatatggtggctaacctggcgaaagatctggggatcagggttggagaactgtcc
tctagaggagctcaaatccattacaaaggaaacaaagaacttttgcagctggatgcagag
actgggaatttgttcttaaaggaaaaactagacagagaactgctgtgtggagagacagaa
ccctgtgtgctgaacttccagatcatactggaaaaccctatgcagttcttccaaactgaa
ctgcagctcacagatataaacgaccattctccagagttccccaacaagaaaatgcttcta
acaattcctgagagcgcccatccaggaactgtgtttcctctgaaggcagctcaggactct
gacatagggagcaacgctgttcagaactacacagtcaatcccaacctccatttccacgtc
gttactcacagtcgcacagatggcaggaaatacccagagctggtggtggacagagccctg
gatagggaggagcagcctgagctcactttaatcctcactgctctggatggtggaacccca
cgccgctcaggaaccaccacagttcacatagaagttgtggacatcaatgataactccccc
cagtttgtacagtcactctataaggtgcaagttcctgagaataatcccctcaatgccttt
gttgtcacggtctctgccacggatttagatgctggggtatatggcaatgtgacctattct
ctgtttcaagggtatggggtatttcaaccatttgtaatagacgaaatcactggagaaatc
catctgagcaaagagctggattttgaggaaattagcaatcataacatagaaatcgcagcc
acagatggaggaggcctttcaggaaaatgcactgtggctgtacaggtgttggatgtgaat
gacaacgccccagagttgacaattaggaagctcacagtcctggtcccagaaaattccgca
gagactgtagttgctgtttttagtgtttctgattctgattcgggggacaatggaaggatg
gtgtgttctattccgaacaatatcccatttctcctgaaacccacatttgagaattattac
acgttagtgactgaggggccacttgatagagagaacagagctgagtacaacatcaccatc
acggtctcagatctgggcacacccaggctcacaacccagcacaccataacagtgcaagtg
tccgacatcaacgacaacgcccctgccttcacccaaacctcctacaccatgtttgtccac
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgccgcctgatgacccgcagctggccctcgac
tcgctcatctccatcaatgttgacaatgggcagctgttcgcgctcagagctctagactat
gaggctctgcagtccttcgagttctacgtgggcgctacagatggaggctcgcctgcactc
agcagccagactctggtgcggatggtggtgctggatgacaatgacaatgcccccttcgtg
ctctacccactgcagaatgcctcagcaccctgtactgagctactgcctagggcagcagag
cccggctacctgatcaccaaagtggtggctgtggatcgcgactctggacagaatgcttgg
ctgtcgttccagctacttaaagctacagagccagggctgttcagtgtatgggcacacaat
ggtgaagtgcgcaccactaggctgctgagtgagcgagatgctcagaagcacaagctactg
ctgctggtcaaggacaatggcgatcctctgcgctctgccaatgtcactcttcacgtgcta
gtggtggatggcttctcgcagccttacctaccattggctgaggtggcacaggattccatg
caagataattacgacgttctcacactgtacctagtcattgccttggcatctgtatcttct
ctcttcctcttgtctgtagtgctgtttgtgggggtgaggctgtgcaggagggccagggag
gcctccttgggtgactactctgtgcccgagggacactttcctagccacctagtggatgtc
agcagtgctgggaccctgtcccagagttatcaatatgaggtgtgtcttaatggaggtact
agaacaaatgagtttaactttcttaaaccattgtttcctatccttccgacccaggctgct
gctgctgaagaaagagaaaacgctgttgtgcacaatagcgttggattctattag
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