Rattus norvegicus (rat): 25218
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Entry
25218 CDS
T01003
Symbol
Vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
25218 (Vps52)
Membrane trafficking [BR:
rno04131
]
Protein recycling
Others
EARP complex
25218 (Vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
25218 (Vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
CCDC113_CCDC96_CC
Dor1
COG6_N
Motif
Other DBs
NCBI-GeneID:
25218
NCBI-ProteinID:
NP_149088
RGD:
3618
Ensembl:
ENSRNOG00000000470
Vega:
OTTRNOG00000001938
UniProt:
O55166
B2GUV2
LinkDB
All DBs
Position
20:complement(4922599..4933458)
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AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDMEEEEGPLGAGSGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISCEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEVRDEYVETLSKIYLSYY
RSYVGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGAVISPAELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLSMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTLQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKASVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggcgaccatggcggctgctgcccgggagctggtgttgcgggccggcgct
tcagatatggaggaggaggagggcccgctgggggctggttctggactccaagagccccta
caactcggggagttggatatcacctctgatgaattcatcttggatgaagtggatgttcac
atccaggcaaatctggaagacgagttagtgaaggaagctctcaaaacgggtgtggatctt
cgacactattcaaagcaggtggagctagagctgcagcagattgagcagaagtcaatccgg
gactacatccaagagagtgaaaacatagcctctctgcacaatcagatcacagcctgtgat
gccgtcctagagcgcatggagcagatgctgggagcttttcagagcgacctcagctccatc
agctgtgagatccgcaccctgcaggagcagtcgggggccatgaacatccgacttcgtaac
cggcaggcagttcgggggaaacttggggaactcgtcgatgggctagtggtgccctctgct
ctggtcacagcaattctcgaagctccagtgacagagcccaggttcctggagcagctccag
gagctggacgccaaggcggctgcggtcagagagcaggaggcgagaggcacggccgcctgt
gcagacgtcagaggcgtgctcgaccggctccgggtcaaggcggtgacaaagatccgtgag
ttcattctccagaagatttactcgttccgaaagccgatgaccaactatcagatcccccag
acggccctgctgaagtacaggtttttctatcagtttctgctgggcaacgagcgtgctaca
gccaaggaggtcagggatgagtacgtagagacgctgagcaagatctacctgtcatactac
cgctcgtacgtggggcggctcatgaaagtgcagtacgaggaagttgctgagaaagacgat
ctaatgggtgtagaagacacagcaaagaaaggattcttctcgaagccgtccctgcgaagc
aggaacaccatctttaccctgggcacccgtggtgctgtcatctcaccggccgagctcgag
gcccccatcctggtgccccatactgcccagcgtggagagcagaggtacccgtttgaagca
ctcttccgcagccagcactatgccctccttgacaattcttgccgtgaatatctcttcatc
tgtgaatttttcgtcgtctctggcccggctgcccatgacctgttccacgccgtcatgggc
cgcacgctgtccatgacgctgaaacacctggagtcctacctggccgactgctacgacgcc
attgctgtttttctctgtatccacatcgttctccggttccgcaacatagcagcaaagagg
gacgtccctgccctggacagatactgggagcaggtgctggccctgctgtggcctcgattt
gagctcatcctggagatgaatgtgcagagcgtccgcagcactgacccccagcgcctcggg
gggctggacacccggccccactatatcacacgccgctacgccgagttctcctccgcgctt
gtcagcatcaaccagaccatccccaatgagcgcacgctgcagctgctgggacagctacag
gtggaggtggagaactttgtcctccgcgtggctgcggagttctcctccaggaaggagcag
ctcgtgtttctgatcaacaactatgacatgatgctgggtgtgctgatggagcgggctgct
gacgacagcaaagaggtggagagtttccagcagctgctcaatgctcggacacaggagttc
attgaagagttgctgtcacccccctttggaggtctggtggcatttgtgaaggaggctgaa
gccttgattgagcgtgggcaggctgagcggctccgaggggaggaagcccgagtcacccag
ctgatccgcggctttggtagttcctggaaggcgtcagtggagtccctgagtcaggatgta
atgcggagttttaccaactttcgaaatggaaccagcatcatccagggggcgctcacacag
ctgatccagctctaccatcgcttccaccgtgtgctgtcccagcctcagctccgtgccctc
cctgccagggccgaactcatcaacatccatcacctcatggtggagctgaagaaacacaag
ccgaacttctga
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