Rattus norvegicus (rat): 25281
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Entry
25281 CDS
T01003
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03250
Viral life cycle - HIV-1
rno05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
25281 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
25281 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
25281 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
25281 (Nup153)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
25281 (Nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
25281
NCBI-ProteinID:
NP_001093940
RGD:
3216
Ensembl:
ENSRNOG00000001456
UniProt:
G3V662
LinkDB
All DBs
Position
17:18178434..18231109
Genome browser
AA seq
1468 aa
AA seq
DB search
MASGAGGIGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYF
NKSENACSCSVNADEVPRWPENREDEREIYVDENTNTDDGRTTPEPTGSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASEKDIAVSKNTSLPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTL
STSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDSTVFQAKKEKVDS
QYPPVQRLMTPKPVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKNISRQNREQ
ESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTTHFVASKPSEEEEVEVPLLPQISLPIS
SSSLPTFNFSSPAISAASSSSVSPSQPLSNKVQMTSLGSTGNPVFTFSSPIVKSTQADVL
PPASIGFTFSVPLAKTELSGPNSSSETVLSSSVTAQDNTVVNSSSSKKRSAPCEDPFTPA
KILREGSVLDILKTPGFMSPKVDSPALQPTTTSSIVYTRPAISTFSSSGVEFGESLKAGS
SWQCDTCLLQNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKP
AIGTWDCDTCLVQNKPEAVKCVACETPKPGTGVKRALPLTVASESPVTASSSTTVTTGTL
GFGDKFKRPVGSWECPVCCVSNKAEDSRCVSCTSEKPGLVSASSSNPVPVSLPSGGCLGL
DKFKKPEGSWDCEVCLVQNKADSTKCIACESAKPGTKSEFKGFGTSSSLNPAPSAFKFGI
PSSSSGLSQTFTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFPKPTGDFKFGVLPDS
KPEEIKNDSKNDNFQFGPSSGLSNPASSAPFQFGVSTLGQQEKKEELPQSSSAGFSFGAG
VANPSSAAIDTTVTSENKSGFNFGTIDTKSVSVTPFTYKTTEAKKEDASATKGGFTFGKV
DSAALSSPSMFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSS
KPTFSFSVAKPSVKESDQLAKATFAFGNQTNTTTDQGAAKPAFSFLNSSSSSSSTPATSS
SASIFGSSTSSSSPPVAAFVFGQASNPVSSSAFGNSAESSTSQPLLFPQDGKPATTSSTA
SAAPPFVFGTGASSNSTVSSGFTFGATTTSSSSGSFFVFGTGHSAPSASPAFGANQTPTF
GQSQGASQPNPPSFGSISSSTALFSAGSQPVPPPTFGTVSSSSQPPVFGQQPSQSAFGSG
TANASSVFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAAAAQPSGSGGFSFSQSPASFTV
GSNGKNMFSSSGTSVSGRKIKTAVRRKK
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggagccggaggcataggagggggcggcggcggcggcaagatccggacgcgt
cgttgccaccaggggccggtgaagccttaccagcaggggcgaccccaacaccagggcatt
cttagcagggttacagaatctgttaagaatattgtaccagggtggctacagagatacttc
aacaagagtgaaaatgcctgtagctgttcagtaaatgcagatgaagttccacgttggccg
gaaaatagagaagatgagcgtgagatttatgtggatgagaacacaaacactgatgacggg
agaaccacccctgagcccacaggcagtaacacagaagaaccatcaaccaccagtactgct
tcaaattatccagatgtattaacaagaccttctcttcatcggagtcatctgaatttctcc
gtgttagaatcccctgctttgcactgtcagccatccacgtcctctgcattcccaatcggc
agttctggattttcccttgtgaaggagattaaagattctacctctcagcatgatgatgat
aacatctcaactaccagtgggttctcttcaagagcttctgagaaagatatagctgtttca
aagaacacttccctgccacctttgtggtcccccgaagcagagcgttctcattcactctca
caacatactgccatcagctccaaaaaaccagcattcaacttgtctgcctttggaacactt
tccacctcacttgggaattcttcaattcttaaaacaagtcaacttggagactctcctttt
tatcctggcaaaacaacatatggtggggcagctgctgctgtaagacagaataaagtacga
agtacaccttaccaggctccagttcgaagacagatgaaagccaagcagctcaatgcacag
tcttatggtgtgaccagttcaacagcacggcggatattgcagtcattagaaaagatgtca
agccctcttgcggatgcaaaaagaattccatctgctgtttcttctcctctgaattctccc
cttgataggagtgggatagatagcacagtttttcaggcaaaaaaggaaaaggtggactct
cagtatccccctgttcagagactaatgaccccaaagccagtttccatagcaacaaataga
actgtctattttaaaccatctctgaccccatctggtgacttaaggaagactaatcaaagg
atagataaaaagaacagtactgtagatgaaaaaaatatctcaagacaaaatagagagcaa
gaaagtggcttttcataccccaatttcagtattcctgcagccaatggtttatcttctgga
gtaggtggtggaggtggcaagatgagaagagagagaacaacacattttgttgcttctaaa
ccttcagaggaggaggaagtagaagtaccattgttaccgcaaatctctctaccaatcagc
agttcttcactgcccaccttcaactttagttcccctgcgatctcggctgcttcttcgtca
tcagtcagcccttctcagccattatcaaacaaggtacagatgacctctctgggcagcaca
ggcaatcccgtgttcaccttttcctctcccattgtgaagtccacgcaggcagacgtgcta
cctccagcatctattggatttacgtttagtgtgcctcttgcaaaaacagaactttctggc
cctaatagttcttcagaaacagttttaagtagttcagttacagctcaagataacactgta
gtgaatagttcaagctctaagaagcgaagtgccccttgtgaggacccttttacacctgca
aagatcctgagagaaggaagtgttttagacattctgaaaacgcctggtttcatgtcacca
aaggttgattctcctgctcttcagcccacaactacaagctcaatagtttatacaagacca
gcaataagtactttttcttctagtggggttgagtttggagaaagtttaaaagctggatca
tcatggcagtgtgacacatgtctactccagaacaaagtcacagacaataagtgtatagcc
tgtcaagcagcaaaactgccactgaaagaaactgctaaacagactggaattgggacacca
agcaaaagtgacaagccagcttctacatcagggacaggttttggagataaatttaaacca
gcaataggaacttgggattgtgatacctgtttagtgcaaaataagcctgaagcagtaaaa
tgtgtagcctgtgaaacacccaaacctggcactggtgtgaagcgagcccttccattgacg
gtggcttcagaaagtcctgtgactgcttcctcttctaccaccgtgaccactggtacacta
ggatttggagataaattcaaaaggcccgtgggatcttgggagtgtccggtatgctgtgtt
tctaataaggcagaagacagcagatgtgtctcctgtacatctgagaaaccaggtttggta
tctgcctcaagcagcaaccctgtccctgtctctctgccttctggaggctgtttaggattg
gacaagtttaaaaaaccagagggaagctgggactgtgaagtatgcctagtgcaaaataaa
gcggactctaccaagtgcatagcttgtgaaagtgcaaagccaggcacaaagtctgagttt
aaaggctttgggacatcttcatctttaaatccagcaccctcagccttcaaatttggtatt
ccatcatcatcttctgggctttctcaaacttttacaagcactggaaattttaaatttgga
gatcagggaggattcaaattaggcacttcatctgactctgggtctacaaacaccatgaat
acaaactttaaatttcctaaaccaactggagattttaaatttggagtattacctgattcc
aaacctgaagaaataaaaaacgacagcaagaatgataattttcagtttggaccttcttct
ggcttaagcaatccagcgtcttcagctccatttcagtttggggtatctactcttgggcag
caggaaaagaaagaggagctgcctcagtcttcatctgcaggcttcagttttggtgcaggt
gttgctaacccctctagtgctgctattgacaccacagtgacctcagagaacaagagcggc
ttcaactttggaaccatagacactaagagtgtctcagtgactcctttcacgtacaagaca
acagaagcaaagaaagaagacgcgtctgctaccaagggtgggttcacatttggtaaagtg
gactctgctgctttgtcatctccctcaatgtttgtgttgggaaggacagaggagaaacag
caagaacctgttacttctacttctctggtatttggaaagaaagctgacaatgaggagcca
aagtgtcaaccagtattttcctttggaaattcagagcaaaccaaagacgagagttcctcc
aagccgaccttcagtttcagtgtggcaaaaccatctgtgaaggagtctgatcagctggcc
aaggctacttttgcatttggaaatcaaaccaatacaacaactgatcaaggtgcagcaaag
ccagcttttagcttcttgaacagcagttcctctagttcaagtacgccggccacttcatcc
agtgctagcatatttggtagttccacctcttcctccagcccgcctgtggcagcctttgtg
tttggacaggccagtaatcctgtcagcagctctgccttcggaaactccgccgagtccagt
acatctcagcctttgctctttcctcaagatggcaaaccagccaccacgtccagcactgcc
tcagctgcccctccatttgtatttggaacaggagccagtagtaatagtactgtatcttct
gggttcacttttggggctacaaccacatcaagctcttcaggatccttctttgtatttggc
actggacattcagcaccatctgccagtccagcatttggtgctaaccagactccaacattt
ggacaaagtcaaggtgccagccagcctaaccctccaagctttggctctatatcgtcttca
acagcattattttctgctggttctcagcctgtaccaccacctacatttgggacagtgtca
agcagcagccaacctcctgtgtttggacagcagcctagtcagtctgcatttggctctggg
acagccaatgctagttcggttttccagtttggcagcagcactacaaatttcaacttcaca
aacaataatccatcaggagtgttcacatttggtgcaagtcccagcacgcctgcagccgca
gcccagccctcaggttcggggggcttttcattcagccagtctccagcatcatttacagtg
gggtcaaatgggaaaaatatgttctcttcttccggaacttcagtttctggtcgcaagata
aagactgctgttagacgcaagaaataa
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integrated database retrieval system
