Rattus norvegicus (rat): 252855
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Entry
252855 CDS
T01003
Symbol
Sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
252855 (Sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
252855 (Sfpq)
03041 Spliceosome [BR:
rno03041
]
252855 (Sfpq)
Protein phosphatases and associated proteins [BR:
rno01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
252855 (Sfpq)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
252855 (Sfpq)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
252855 (Sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
252855
NCBI-ProteinID:
NP_001020442
RGD:
727923
Ensembl:
ENSRNOG00000058461
UniProt:
Q4KM71
LinkDB
All DBs
Position
5:144621678..144637930
Genome browser
AA seq
699 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGGPKPPLPP
PPPHQQQQQPPPQQPPPQQPPPHQQPPPHQPPHQQPPPPPQESKPVVPQGPGSAPGVSTA
PPPAVSAPPANPPTTGAPPGPGPTPTPPPAVPSTAPGPPPPSTPSSGVSTTPPQTGGPPP
PPAGGAGPGPKQGPGPGGPKGGKMPGGPKPGGGPGMGAPGGHPKPPHRGGGEPRGGRQHH
APYHQQHHQGPPPGGPGPRTEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEY
EYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHSQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDPRER
DMRMGGGGTMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTERFG
QGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccggagccgcggtggtggtggtggaggctttcatcggcgtgga
ggaggcggtggccgcggcggcctccacgacttccgctctccgccgcctggcatgggcctc
aaccagaatcgcggccccatgggccccggccctggcggcccgaagccaccgctcccgcct
ccacctccgcaccagcagcagcagcaacctccgccgcagcagcccccgccgcagcagcct
ccaccgcaccagcagccgccgccacaccagccgccccatcaacagcccccgcctccgccg
caggaatccaagcccgtcgtcccgcaaggccccggctcggcgcccggagtgagcactgcg
ccgcctccggcggtctcggccccgcccgccaacccccctaccaccggcgccccgccgggc
ccgggtcctaccccgactccgccgcccgcagtcccctctactgcccccggaccgcctccc
ccttccacgccgagcagcggagtctcaacaacgcctccacagaccggtggccctccgcca
ccgcccgccgggggcgccggtccagggcctaagcaaggcccaggccctggcggtcccaaa
ggcggcaagatgccgggtgggcctaagcctggcggtggtccgggcatgggcgctcctggt
ggccacccgaagccacctcaccgaggtggcggggagccccgtgggggccggcagcaccac
gcgccctaccaccagcagcaccatcagggcccccctcccggcggcccgggacctcgcaca
gaggaaaagatatccgactcggagggatttaaagccaacttgtctctcttgcggaggcct
ggagaaaaaacttacacacagcgctgtcggttgtttgtggggaacctacctgctgatatc
acagaggatgaattcaaaagactgtttgctaaatacggagaaccgggagaagtttttatc
aacaagggcaaagggttcgggttcattaaacttgagtcaagagccttggctgaaattgcc
aaagctgaacttgatgatacccccatgagaggtagacagctacgggttcggtttgccaca
catgctgcagccctgtctgttcggaatctttctccttatgtatccaatgaacttttggaa
gaggcctttagccagtttggtcctattgaaagggctgttgtaattgtggatgatcgtgga
agatccacggggaaaggcattgttgaatttgcttcgaagccagcagcaagaaaagcattt
gaaagatgcagtgaaggtgttttcctactgacaacgactcctcgcccagtcattgtggaa
ccacttgagcagttagatgatgaagatggtcttcctgaaaaactggcccagaagaatcca
atgtatcaaaaggagagagaaacgcctcctcgttttgctcagcatggcacatttgagtat
gaatattctcaacgatggaagtctttggatgaaatggaaaaacagcaaagggaacaagtt
gaaaaaaacatgaaggatgcaaaagacaagttggaaagtgaaatggaagatgcctaccat
gaacaccaagcaaatcttttgcgccaagatctgatgagacgccaggaagaattaaggcgc
atggaggaacttcacagtcaagaaatgcagaaacgtaaagaaatgcagttgaggcaagag
gaggaacggcgtagaagagaggaagagatgatgattcgccaacgtgagatggaagaacaa
atgagacgccaacgagaagaaagctacagcaggatgggctacatggatccaagagaaaga
gacatgagaatgggtggtggtggaacaatgaacatgggagatccctatggttcaggaggc
cagaaatttccaccgctaggtggtggtggtggcataggttatgaagctaatcctggagtt
ccaccagcaaccatgagtggttccatgatgggaagcgacatgcgtactgagcgctttggg
cagggaggtgcgggtcctgtgggtggacagggtcctagaggaatggggcctggaacgcca
gcaggatatggtagagggagagaagagtatgaagggccaaataaaaaaccccgattttag
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integrated database retrieval system