Rattus norvegicus (rat): 25304
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Entry
25304 CDS
T01003
Symbol
Comp
Name
(RefSeq) cartilage oligomeric matrix protein precursor
KO
K04659
thrombospondin 2/3/4/5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
rno04151
PI3K-Akt signaling pathway
rno04510
Focal adhesion
rno04512
ECM-receptor interaction
rno04820
Cytoskeleton in muscle cells
rno05144
Malaria
rno05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
25304 (Comp)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
25304 (Comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
25304 (Comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
25304 (Comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
25304 (Comp)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
25304 (Comp)
09174 Infectious disease: parasitic
05144 Malaria
25304 (Comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
25304 (Comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
25304 (Comp)
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
25304 (Comp)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Phagocytosis
Opsonins
25304 (Comp)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
25304 (Comp)
Exosomal proteins of colorectal cancer cells
25304 (Comp)
Exosomal proteins of bladder cancer cells
25304 (Comp)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
25304 (Comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
25304
NCBI-ProteinID:
NP_036966
RGD:
2378
Ensembl:
ENSRNOG00000048472
Vega:
OTTRNOG00000001988
UniProt:
P35444
Structure
PDB
LinkDB
All DBs
Position
16:complement(19081172..19089548)
Genome browser
AA seq
755 aa
AA seq
DB search
MSPTACVLVLALAALRATGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRQQVKEITF
LKNTVMECDACGMQPARTPGLSVRPVPLCAPGSCFPGVVCTETATGARCGPCPPGYTGNG
SHCTDVNECNAHPCFPRVRCINTSPGFHCEACPPGFSGPTHEGVGLTFAKTNKQVCTDIN
ECETGQHNCVPNSVCVNTRGSFQCGPCQPGFVGDQRSGCQRRGQHFCPDGSPSPCHEKAD
CILERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQED
VDRDGIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDKDKWGDACDNCRSQKNDDQKDT
DRDGQGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVD
HDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRD
NCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVCPENAEVTLTDFRAFQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFG
YQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTAS
QVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTAMRGGRL
GVFCFSQENIIWANLRYRCNDTIPEDYERHRLRRA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagccccactgcctgcgttctagtgctcgccctggctgccttgcgggctaccggccag
ggccagatcccgctgggtggagacctagccccacagatgcttcgagaactccaggagact
aatgcggcgctgcaagacgtgagagagctcttgcgacagcaggtcaaggagatcaccttc
ctgaagaatacggtgatggaatgtgacgcttgcggaatgcagcccgcacgcacccccggt
ctgagcgtgcggccagtgccgctctgcgcacccggctcctgcttccctggcgtagtctgc
acggagacagctaccggcgcgcgctgcggcccctgccctccgggctacaccggcaacggc
tcgcactgcaccgacgttaatgagtgcaacgctcacccctgtttcccgcgcgtgcggtgc
atcaataccagccctggctttcactgcgaagcctgtccccctgggttcagcgggcccacc
cacgagggtgtggggctgaccttcgccaagaccaacaaacaagtttgcacagatattaat
gagtgtgagaccgggcagcacaattgcgttcccaactccgtgtgcgtcaacacccggggc
tccttccagtgcggtccctgccagcccggcttcgtgggcgaccagaggtcaggctgccag
cggcgtgggcaacacttctgccccgacgggtcacccagcccgtgccatgagaaagcagac
tgtattttggagcgcgacggctcaaggtcctgcgtgtgtgcggtcggctgggccggcaac
gggctcctgtgcggacgcgacacagacctggacggtttcccggacgagaagcttcgctgc
tcagagcgccagtgccgcaaggacaactgcgtgacggtgcccaattcagggcaggaggat
gtggaccgggacggcattggagatgcttgtgacccggatgcggacggggatggagtccct
aatgagcaagacaattgcccgctggttcgaaacccagaccagcgcaactcggataaagac
aagtggggagatgcctgcgacaactgccggtcccagaagaatgatgaccagaaagataca
gaccgggatggccagggcgatgcctgcgacgacgacatagatggcgatcgaatccgaaat
gtagctgacaactgtccccgggtgcccaactttgaccagagtgacagcgatggtgatggt
gttggggatgcctgtgacaattgtccccagaaagacaacccggaccagagggacgtggac
cacgactttgtgggtgatgcctgtgacagtgaccaagaccaggacggggatggacaccaa
gactcccgggacaactgccccacagtacccaacagtgcccagcaggactcagaccatgat
ggcaagggtgatgcctgtgatgatgacgacgacaatgacggagtccctgacagccgggac
aattgccgcttggtgcccaacccgggccaagaggacaatgaccgggatggcgtgggtgac
gcttgtcagggtgacttcgatgctgacaaggttatagacaagatcgatgtgtgccccgag
aacgccgaggtcactctcaccgacttcagggccttccaaacagttgtgctggaccccgag
ggtgatgcgcagatcgaccccaactgggtggtgctcaatcagggaatggagatcgttcag
accatgaacagtgaccctggcctggctgtgggttacacggcattcaacggtgtagatttt
gagggaacgttccatgtaaacaccgccaccgatgatgactacgctggcttcatcttcggc
tatcaagacagctcaagtttctatgtggtcatgtggaaacagatggagcagacgtactgg
caggccaatcctttccgggcagtggctgaaccagggattcagctcaaggctgtcaagtcc
tctacaggtcccggggaacagctccgaaatgcgttgtggcacacgggggacacagcatcc
caggtgcggctgctgtggaaggatcctcgaaatgtgggctggaaggataagacatcctac
cgctggttcctgcagcaccggcctcaagtcggctacatcagggtgcggttctatgagggt
cctgagctagtagctgacagcaacgtggtgctggacacagctatgcgtggtggccgcctg
ggtgtcttctgcttctcccaagagaatatcatctgggctaacctgcgctaccgttgcaat
gatacaatccctgaggactatgagcgtcaccggctgcggagggcctag
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