Rattus norvegicus (rat): 25459 Help Entry 25459             CDS       T01003                                  Symbol Hmgb1 Name (RefSeq) high mobility group protein B1   KO K10802   high mobility group protein B1 Organism rno  Rattus norvegicus (rat) Pathway rno03410   Base excision repair rno04140   Autophagy - animal rno04217   Necroptosis rno04613   Neutrophil extracellular trap formation Brite KEGG Orthology (KO) [BR:rno00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     25459 (Hmgb1)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     25459 (Hmgb1)   09143 Cell growth and death    04217 Necroptosis     25459 (Hmgb1)  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     25459 (Hmgb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:rno03036]     25459 (Hmgb1)    03400 DNA repair and recombination proteins [BR:rno03400]     25459 (Hmgb1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:rno04147]     25459 (Hmgb1) Chromosome and associated proteins [BR:rno03036]  Eukaryotic type   Nucleosome assembly factors    HMG (high mobility group) proteins     25459 (Hmgb1) DNA repair and recombination proteins [BR:rno03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      25459 (Hmgb1)    MMR (mismatch excision repair)     Other MMR factors      25459 (Hmgb1) Exosome [BR:rno04147]  Exosomal proteins   Exosomal proteins of colorectal cancer cells    25459 (Hmgb1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14 Motif Other DBs NCBI-GeneID:  25459 NCBI-ProteinID:  NP_037095 RGD:  2802 UniProt:  P63159 B4F758 Structure PDBPDBj LinkDB All DBs Position 12:11009236..11015941 Genome browser AA seq 215 aa AA seqDB search MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK SKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE NT seq 648 nt NT seq  +upstreamnt  +downstreamnt atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg caaacctgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag ttctccaagaagtgctcagagaggtggaagaccatgtctgctaaagaaaaggggaaattt gaagatatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc cccaaaggggagaccaaaaagaagttcaaggaccccaatgcccccaagaggcctccttcg gccttcttcttgttctgttctgagtaccgcccaaaaatcaaaggcgagcatcctggctta tccattggtgatgttgcgaagaaactaggagagatgtggaacaacactgctgcggatgac aagcagccctatgaaaagaaggccgccaagctgaaggagaagtatgagaaggatattgct gcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggtcaaggctgagaag agcaagaaaaagaaggaagaggaagacgacgaggaggatgaagaggatgaggaagaggag gaagaggaggaagacgaagatgaagaagaagatgatgatgatgaataa

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