Rattus norvegicus (rat): 25479
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Entry
25479 CDS
T01003
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
25479 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
25479 (Vps35)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
25479 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
CENP-O
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
25479
NCBI-ProteinID:
NP_001099188
RGD:
1589784
Ensembl:
ENSRNOG00000017612
UniProt:
G3V8A5
A6KDF0
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All DBs
Position
19:37938989..37974887
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDELSDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcaatcaccccaggatgagcaagaaaaactcttggatgaagccatc
caggctgtgaaagttcaatcattccagatgaaaagatgcctggacaaaaacaagctgatg
gacgctctgaaacatgcctcgaatatgcttggagaactccggacttctatgttatcacca
aagagttactatgaactttatatggctatttctgatgagctgcactacttggaggtctat
ttgactgatgaatttgctaaaggaagaaaggtggcagatctctatgaacttgtacagtat
gctggaaacattattccaaggctttatctcttgatcacagttggagttgtgtatgtcaag
tcatttcctcagtccaggaaagatattctgaaagatttggtagaaatgtgccgtggcgtg
cagcatccactaaggggtttgtttcttcgaaattatcttcttcagtgtactaggaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtactactcaactttgcagaaatgaataagctctgggtgcggatgcagcatcaa
ggacatagtcgagatagagaaaaaagagaacgagagagacaagaactgagaattttagtg
ggaactaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttaacaggcattttggagcaagttgtgaattgtagagatgctttggctcaagag
tatctcatggagtgcatcattcaggtttttcctgatgaattccatctccagactttgaat
ccttttcttagagcttgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacctggaattccagct
gagattaaactttttgacatattttcacaacaggtggctacagtgatacagtccagacaa
gacatgccatcagaggacgttgtatctttacaagtctctctcattaatcttgctatgaaa
tgttaccctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattc
aataaacttaaccttgaacatattgctaccagtagtgcagtttcaaaggagcttaccaga
cttttgaagattccagttgatacttacaacaatatcttaacagtcttaaagttaaagcat
ttccacccactttttgagtactttgactacgagtccagaaagagcatgagctgttatgtg
cttagtaatgttctggattataacacagaaatcgtctctcaggaccaggtagattccata
atgaatttggtgtccacgttgattcaggatcagccagaccagcctgtagaagaccctgac
ccagaagactttgctgatgaacagagccttgttggccgatttattcaccttctgcgttct
gaagaccctgatcagcagtatttgattttgaatacagcacgaaaacattttggggctggt
ggaaatcagcggattcgcttcacactgccacctttggtatttgcagcttatcagttggct
tttcggtacaaagagaattctcaaatggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgcccatcagactatcagtgctttgattaaagccgagctggctgagttacca
ctgagactttttcttcaaggagcattagctgctggggagattggcttcgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcgttttctctatatgaggatgaactcagtgac
tccaaagcacagctggctgctatcactttgatcattggtacttttgagaggatgaaatgc
ttcagtgaagagaatcatgagcccttgagaactcagtgtgcacttgctgcatcaaaactt
ctgaaaaaaccggaccaaggccgagctgtgagcacatgtgcacatctcttttggtctggc
cgaaacacagacaaaaatggggaagagcttcatggaggtaaaagggtcatggagtgccta
aagaaggcactaaaaatagcaaatcagtgcatggacccctctctacaagttcagctcttt
atagagattctgaacaggtacatctatttctatgaaaaagaaaatgatgcggtaacaatt
caggtcttgaaccaacttattcaaaaaattcgagaagatctcccaaaccttgagtccagt
gaagaaacagagcaaattaacaagcattttcacaacacgttggagcacttgcgctcaaga
cgggaatcaccagagtctgaggggccaatctatgaaggtctcatcctttaa
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integrated database retrieval system
