Rattus norvegicus (rat): 25497
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Entry
25497 CDS
T01003
Symbol
Nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
25497 (Nup50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
25497 (Nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
25497 (Nup50)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
25497 (Nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
25497
NCBI-ProteinID:
NP_037123
RGD:
3191
Ensembl:
ENSRNOG00000013423
UniProt:
O08587
G3V7R1
A6HTC6
LinkDB
All DBs
Position
7:117927882..117945155
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AA seq
467 aa
AA seq
DB search
MAKRVAEKELTDRNWDEEDEVEEMGTFSVASEEVMKNRAVKKAKRRNIGFESDSGGAFKG
FKGLVVPSGGGGFSGFGGGSGGKPLEGLTNGNSTDSATPFSSAKTAAEPKAAFGSFAVNG
PTTLVDKKISSPKCNSSNQPPSSGPASSTSCTGNTYHKQLAGLNCSVRDWIVKHVNTNPL
CDLTPIFKDYERYLATIEKQLENGGSSSSESQTDRATAAMEPPSLFGSTKLQQDSPFSFH
GNKAEDTSEKLEFTAEKKSDAAQGATSASFNFGKKIESSVLGSLSSGSLTGFSFSPGNSS
LFGKDAAQSKAASSPFSAKASESQAGGSSSECRDGEEEESDEPPKVVVTEVKEEDAFYSK
KCKLFYKKDNEFKEKGVGTLHLKPTATQKTQLLVRADTNLGNILLNVLIPPNMPCTRTGK
NNVLIVCVPNPPLDEKQPTLPVTMLIRVKTSEDADELHKILLQKKDV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagagttgcggagaaggaattaacagataggaattgggatgaagaagatgaa
gttgaagagatgggaacattctcagtggccagtgaggaagtcatgaagaacagagccgtg
aagaaggcaaagcgtaggaatattggctttgaatctgatagcggaggagcctttaaaggt
ttcaaagggttggttgtgccttctggaggaggagggttttctggatttggtggtggctct
ggagggaagcctctggaaggactgacaaatggaaacagcacagacagtgccacgcccttc
tccagtgcaaagacagcagcggagcctaaggcagcctttggttcttttgctgtgaatggc
cctactactttggtggataaaaagatctccagtcctaaatgcaatagcagcaatcagccg
ccctcctccggcccagcctccagtacctcctgcactgggaatacctatcataagcagttg
gctggcttgaactgctctgtccgggattggatagtgaagcatgttaacacaaacccactt
tgtgacctgacgcccatttttaaagactacgagagatacttagcgacgatcgagaagcag
ctggagaatgggggtagcagcagctcagagagccagacagacagggcgacggctgcaatg
gagcctccttccctttttggttcaacaaaactacagcaagattcaccattttcatttcat
ggcaacaaagcggaggacacatctgaaaagttggagtttacagcagaaaagaaatcggac
gcagcacaaggagcaacaagtgcctcgtttaattttggcaagaaaattgagagctcagtt
ttgggctctttaagctctggctccctaactgggttttcattctctcctggaaactctagt
ttatttggtaaagatgctgcccagagtaaagcagcctcttcaccgttttctgctaaagca
tccgagagtcaagcaggaggcagcagcagtgagtgcagagatggtgaagaagaggagagt
gacgagccacccaaggtggtggtgactgaagtgaaggaagaggatgctttctactccaaa
aaatgtaaactattttacaagaaagacaatgaatttaaagagaagggtgtggggaccctg
catttaaaacccacagcgactcagaagacccagctcttggtgcgggcagacaccaaccta
ggcaacattctgctgaatgttctgatcccacccaatatgccgtgcacccggacagggaag
aacaatgtccttatcgtctgtgtccccaaccccccacttgatgagaagcagcccactctc
ccggtcaccatgctgattcgggtgaagacgagcgaggatgccgatgagttgcacaagatt
ttactgcagaaaaaggacgtctga
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