Rattus norvegicus (rat): 25664
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Entry
25664 CDS
T01003
Symbol
Pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform 1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03320
PPAR signaling pathway
rno04148
Efferocytosis
rno04152
AMPK signaling pathway
rno04211
Longevity regulating pathway
rno04380
Osteoclast differentiation
rno04714
Thermogenesis
rno04932
Non-alcoholic fatty liver disease
rno05016
Huntington disease
rno05200
Pathways in cancer
rno05202
Transcriptional misregulation in cancer
rno05216
Thyroid cancer
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
25664 (Pparg)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
25664 (Pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
25664 (Pparg)
09158 Development and regeneration
04380 Osteoclast differentiation
25664 (Pparg)
09149 Aging
04211 Longevity regulating pathway
25664 (Pparg)
09159 Environmental adaptation
04714 Thermogenesis
25664 (Pparg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
25664 (Pparg)
05202 Transcriptional misregulation in cancer
25664 (Pparg)
09162 Cancer: specific types
05216 Thyroid cancer
25664 (Pparg)
09164 Neurodegenerative disease
05016 Huntington disease
25664 (Pparg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
25664 (Pparg)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
25664 (Pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
25664 (Pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rno03310
]
25664 (Pparg)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
25664 (Pparg)
Nuclear receptors [BR:
rno03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
25664 (Pparg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
25664
NCBI-ProteinID:
NP_037256
RGD:
3371
Ensembl:
ENSRNOG00000008839
UniProt:
O88275
A6IKY3
LinkDB
All DBs
Position
4:150095743..150221104
Genome browser
AA seq
505 aa
AA seq
DB search
MGETLGDPPVDPEHGAFADALPMSTSQEITMVDTEMPFWPTNFGISSVDLSVMDDHSHSF
DIKPFTTVDFSSISAPHYEDIPFTRADPMVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
QLYNRPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
QSKEVAIRIFQGCQFRSVEAVQEITEYAKNIPGFINLDLNDQVTLLKYGVHEIIYTMLAS
LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKVLQKMTDLRQIVTEHVQL
LHVIKKTETDMSLHPLLQEIYKDLY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaactctgggagatcctcctgttgacccagagcatggtgccttcgctgatgca
ctgcctatgagcacttcacaagaaattaccatggttgacacagagatgccattctggccc
accaacttcggaatcagctctgtggacctctctgtgatggatgaccactcccattccttt
gacatcaaaccctttaccacggttgatttctccagcatttctgctccacactatgaagac
atcccgttcacaagagctgacccaatggttgctgattacaaatatgacctgaagctccaa
gaataccaaagtgcgatcaaagtagagcctgcgtccccgccttattattctgaaaaaacc
caactctacaacaggccacatgaagagccttcaaactccctcatggccatcgagtgccga
gtctgtggggataaagcatcaggcttccactatggagtccatgcttgtgaaggatgcaag
ggttttttccgaagaaccatccgattgaagcttatttatgataggtgtgatcttaactgt
cggatccacaaaaagagtagaaataaatgtcagtactgtcggtttcagaagtgccttgct
gtggggatgtctcacaatgccatcaggtttgggcgaatgccacaggccgagaaggagaag
ctgttggcggagatctccagtgatatcgaccagctgaacccagagtctgctgatctgcga
gccctggcaaagcatttgtatgactcatacataaagtccttcccgctgaccaaagccaag
gcgagggcgatcttgacaggaaagacaacagacaaatcaccatttgtcatctacgacatg
aattccttaatgatgggagaagacaaaatcaagttcaaacatatcacccccctgcaggag
cagagcaaagaggtggccatccgcatttttcaagggtgccagtttcgatccgtggaagct
gtgcaagagatcacagagtatgccaaaaatatccctggtttcattaaccttgacttgaat
gaccaagtgactctgctcaagtatggtgtccatgagatcatctacaccatgctggcctcc
ctgatgaataaagatggagtcctcatatcagagggacaaggattcatgaccagggagttc
ctcaaaagcctgcggaagccctttggtgactttatggagcctaagtttgagtttgctgtg
aagttcaatgcactggaattagatgacagtgacttggccatatttatagctgtcattatt
ctcagtggagaccgcccaggcttgctgaacgtgaagcccatcgaggacatccaagacaac
ctgctgcaggccctggaactccagctgaagctgaaccacccggagtcctcccagctgttc
gccaaggtgctccagaagatgacagacctcaggcagattgtcacagagcacgtgcagcta
ctgcatgtgatcaagaagacggagacagatatgagccttcaccctctgctccaggagatc
tacaaggacttgtattag
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