Rattus norvegicus (rat): 25671
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Entry
25671 CDS
T01003
Symbol
Smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04081
Hormone signaling
rno04350
TGF-beta signaling pathway
rno04390
Hippo signaling pathway
rno04550
Signaling pathways regulating pluripotency of stem cells
rno05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
25671 (Smad1)
04390 Hippo signaling pathway
25671 (Smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
25671 (Smad1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
25671 (Smad1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
25671 (Smad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
25671
NCBI-ProteinID:
NP_037262
RGD:
3030
Ensembl:
ENSRNOG00000018483
UniProt:
P97588
Q6P7A6
LinkDB
All DBs
Position
19:45417430..45477962
Genome browser
AA seq
468 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPH
SHPFPQSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQ
PMDTNMTNMTAPTLPAEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVD
GFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQS
RNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFV
KGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaccagcttgttttcattcacaagcccagctgtgaagagactccttgggtgg
aaacagggcgacgaagaagagaaatgggcggagaaggctgtggacgctttggtgaagaaa
ctgaagaagaagaaaggggccatggaagagctggagaaggccctgagctgccccgggcag
ccgagtaactgtgtcaccattcctcgctccctggatggcaggttgcaggtgtcccaccgg
aagggactgcctcatgtcatttattgccgcgtgtggcgctggcccgacctccagagccat
catgaactaaagcctctggaatgctgcgagttcccatttggttccaagcagaaggaagtc
tgcatcaatccctaccactataagcgagtggagagccccgttctcccaccggtgctggtt
ccgaggcacagcgagtacaaccctcagcacagccttctggctcagttccgaaacctggga
caaaatgagccccacatgccactgaatgccacgttccccgactccttccagcagccacac
agccacccgtttccccagtcccccaacagcagctaccccaactctcctggcagcagcagc
agcacctaccctcactccccgaccagctcagacccgggcagcccttttcagatgccagcc
gacacacccccgcctgcttacctgcctcctgaagaccccatggcccaggatggctctcag
cctatggacacgaacatgacgaacatgacggcaccgacactgcccgcggagatcaataga
ggagatgttcaagcagttgcttacgaggaaccaaaacactggtgctctattgtgtactat
gagctcaacaaccgtgtgggcgaagcgttccatgcctcctccaccagcgtgttggtggat
ggtttcaccgatccttccaacaataagaaccgattctgccttgggctgctctccaatgtt
aaccggaactccactattgaaaataccaggcgacacatcgggaaaggagtccacctttat
tacgtcggaggagaggtgtatgcggagtgcctcagtgacagcagcatcttcgtgcagagt
cggaactgcaactaccaccatggctttcatcccaccacggtctgcaagatccccagcggg
tgcagcttgaaaatcttcaacaaccaagagttcgctcagctactggcgcagtctgtgaac
catgggttcgagacagtgtatgaactcaccaaaatgtgcactattcgaatgagcttcgtg
aagggctggggagcagagtaccaccggcaggatgtcactagcaccccctgctggattgag
atacacctgcatggccctctccagtggctggataaagtccttacccagatgggttcgccc
cacaaccctatttcgtcggtgtcttaa
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