Rattus norvegicus (rat): 25687
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Entry
25687 CDS
T01003
Symbol
Cald1
Name
(RefSeq) non-muscle caldesmon isoform 2
KO
K12327
caldesmon
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
25687 (Cald1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
25687 (Cald1)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
25687 (Cald1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
25687
NCBI-ProteinID:
NP_037278
RGD:
2256
Ensembl:
ENSRNOG00000010233
UniProt:
Q62736
A6IEM5
LinkDB
All DBs
Position
4:64232906..64414085
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AA seq
531 aa
AA seq
DB search
MLSRSGSQGRRCLATLSQIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLGQVTDQV
EAHVQNSVPDEESKPATANAQVEGDEEAALLERLARREERRQKRLQEALERQKEFDPTIT
DGSLSVPSRRMQNNSAENETAEGEEKGESRSGRYEMEETEVVITSYQKNSYQDAEDKKKE
EKEEEEEEEKLKGGNLGENQIKDEKIKKDKEPKEEVKNFLDRKKGFTEVKAQNGEFMTHK
LKQTENAFSPSRSGGRASGDKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEA
ALELEELKKKREERRKVLEEEEQRRKQEEADRKAREEEEKRRLKEEIERRRAEAAEKRQK
MPEDGLSEDKKPFKCFTPKGSSLKIEERAEFLNKSVQKSGVKSTHQAAVVSKIDSRLEQY
TNAIEGTKASKPMKPAASDLPVPAEGVRNIKSMWEKGSVFSSPSASGTPNKETAGLKVGV
SSRINEWLTKSPDGNKSPAPKPSDLRPGDVSGKRNLWEKQSVDKVTSPTKV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcagatccgggtcccagggaaggcgctgcctggccacactctctcaaattgcc
tatcagaggaatgatgatgacgaagaagaggctgccagggaacggcgccgccgagcccga
caggaaaggctgcggcagaagcaagaggaagaatccttgggacaggtgacagaccaagtg
gaggcccatgtccagaacagtgtccccgatgaagagtctaagccagccactgcaaatgct
caggtagaaggtgatgaggaggctgctttgctggagcgcctggccaggcgagaagagaga
cgtcaaaaacgccttcaggaagccttagagcgtcagaaggagtttgatccaaccataacc
gatggcagtctctcagtcccaagcagaaggatgcaaaataactcggctgaaaatgagaca
gcagagggggaagaaaaaggagagagtcgctcaggacggtatgagatggaagaaacagaa
gtggtcatcacgtcctaccagaagaacagctatcaggatgctgaagacaaaaagaaagaa
gaaaaggaggaggaggaggaggaagagaagctgaagggagggaaccttggcgaaaatcag
atcaaagatgagaagattaaaaaggacaaagagcccaaagaagaagtcaagaacttcttg
gatcgaaagaaaggatttacagaagtgaaggcgcagaatggagaattcatgacccacaaa
cttaaacaaactgagaatgctttcagccccagccgttcaggaggccgggccagcggggac
aaggaagctgaaggcgccccacaagtggaagccggtaagaggctggaagagctgcgccga
cgccgtggggagacagagagcgaagagttcgaaaaactcaaacaaaagcaacaggaggca
gccttggagctggaagagctgaagaaaaagagggaagagagaaggaaggttctggaggaa
gaggagcagagaaggaagcaggaggaggctgatcgaaaagctagagaggaggaagagaag
aggaggttgaaggaagagatcgaaaggagaagggcagaagctgctgagaaacgccagaag
atgccggaagatggcctatctgaggacaagaagccgttcaagtgcttcactcctaaaggc
tcatctctcaagatagaggagcgagcagagtttttgaataagtctgtgcagaaaagtggt
gtcaaatcaactcatcaagcagctgtggtctccaagattgacagccggctggagcaatat
accaatgcaatcgagggaacgaaagcttcaaaacctatgaagcctgcagcatccgatctt
cctgtccctgcagaaggtgtccgcaatatcaagagcatgtgggagaaagggagtgtgttt
tcatccccctctgcctcggggacaccaaataaggaaactgctggcctgaaggtgggggtt
tccagccgcatcaatgaatggctaactaaatcgccggacggcaacaagtcacccgctccc
aagccttctgacttaaggccaggagatgtatctggcaagcggaacctctgggaaaagcaa
tccgtggataaggtcacttctcccactaaggtctga
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