Rattus norvegicus (rat): 25696
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Entry
25696 CDS
T01003
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor precursor
KO
K20053
very low-density lipoprotein receptor
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05017
Spinocerebellar ataxia
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
25696 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
25696 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
25696 (Vldlr)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
25696 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
25696
NCBI-ProteinID:
NP_037287
RGD:
3963
Ensembl:
ENSRNOG00000027491
UniProt:
F1LPV2
LinkDB
All DBs
Position
1:234239769..234272150
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AA seq
873 aa
AA seq
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MGTSARWALWLLLALCWAPRDSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCTD
GSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCD
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
TSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQ
WPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIIYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDVNTTDILRTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgttgggcgctgtggctgctgctcgcgctgtgctgggcgccccgg
gacagcggcgccactgcaagcgggaagaaagccaaatgtgacagctcccaattccagtgc
acaaatggtcgctgcattactctgctgtggaaatgtgatggagacgaagactgtactgat
ggcagtgacgagaagaactgtgtgaagaagacatgtgctgagtcagacttcgtgtgcaaa
aacggccagtgtgttcccaacagatggcagtgtgatggggaccctgattgtgaagatggt
tctgatgaaagcccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagagtcctggagatgcgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacattacatgtagcgcggatgagttcact
tgctccagtggccgctgtgtctccaggaactttgtgtgcaatggacaggatgactgtgac
gatggcagtgatgagctggactgtgctccaccgacctgcggtgcccacgagttccagtgc
agcacctcctcctgcatcccgctcagctgggtgtgtgacgatgacgcagactgttccgac
caatcagacgagtctcttgagcagtgtggccgtcagcctgtgatacacaccaaatgtccc
accagtgagatccagtgtggctctggcgagtgcattcacaaaaaatggcggtgtgacgga
gacccggactgcaaggacggcagcgacgaggtcaactgtccttctcgaacctgcagacct
gaccagtttgaatgtgaggacggtagctgtatccatggcagcagacaatgcaacggcatc
cgagactgtgttgacggctctgatgaagtcaactgcaaaaacgtcaatcagtgcctgggc
cctggaaagtttaagtgcagaagtggggaatgcatagacatcaccaaagtatgtgaccag
gaacaggactgcagagactggagcgacgagcccctgaaggagtgccatatcaacgaatgc
ttggtcaataacggtggctgttcccatatctgcaaagacctagttataggttatgaatgt
gactgtgcagctgggtttgaactgatagacaggaaaacctgtggagatattgatgaatgc
caaaatccggggatctgcagtcaaatttgtatcaacttaaaaggcggttacaaatgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatcggagagacatcaggaagattggactagagaggaaggaa
tacatccaacttgtagaacaactaagaaacacggtggctctcgatgctgacattgcagct
cagaagctattttgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
actctagacggaaccaagaggaagttcctgtttaactctgatttgcgagagcctgcctcc
atagctgtggatccgttgtctggctttgtttactggtcagactggggtgagccagctaaa
atagaaaaagcaggaatgaatggatttgatagacgtccactggtgacagaggacatccaa
tggcctaatggaattaccctcgaccttgtcaaaagccgcctctactggctggattccaag
ttgcacatgctctctagtgtggacctgaatggtcaagatcgtaggatagtgctcaagtct
ctggagttcctagctcatcctcttgcactcaccatatttgaggatcgtgtctactggata
gatggagaaaatgaagcagtgtatggtgccaataaattcactgggtcagagctggccact
ctagtgaacaatctcaatgatgcccaagacatcattatctaccatgaactcgtccagcct
tcaggtaaaaactggtgtgaggaagatatggagaatggaggatgtgaatatctctgcctg
ccagcaccacagatcaatgatcactctccaaaatatacctgttcctgtcccaatgggtac
aatcttgaagaaaatggacgcgagtgtcaaagtacttcaactcctgtgacttacagtgag
acaaaagatgtcaacacaacagacatcctacgaactagtggacttgttcctggagggatc
aatgtgaccacagcagtatcagaagtcagtgttcccccaaaagggacttcagctgcctgg
gccatccttcctctcttgctcttagtgatggcagcagtaggtggctacttgatgtggagg
aattggcaacataaaaacatgaaaagcatgaactttgacaatcccgtgtacttgaagacc
actgaagaggacctctcaatagacattggtagacatagcgcttctgtaggacacacatac
ccagcaatctcagttgtaagcacagatgatgatttggcttga
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