Rattus norvegicus (rat): 25705
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Entry
25705 CDS
T01003
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05202
Transcriptional misregulation in cancer
rno05206
MicroRNAs in cancer
rno05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
25705 (Zeb1)
05206 MicroRNAs in cancer
25705 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
25705 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
25705 (Zeb1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
25705 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
25705
NCBI-ProteinID:
NP_001295194
RGD:
3831
Ensembl:
ENSRNOG00000017863
UniProt:
Q62947
LinkDB
All DBs
Position
17:complement(56644397..56811155)
Genome browser
AA seq
1109 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVEANSDSDDEDKLHIVEEESVTDAADCEGGVPDD
ELPTDQTVLPGGSDRAGSAKNCWQDDVKDDECDSDAENEQNHDPNVEEFLQQQDTAVIYP
EAPEEDQRQGTPEASGHDDNGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNF
SCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSTSP
GSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQ
LQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNIIRQVLENNQASLASKE
QEAVSASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPGQLQVVPQNLKKENPAPP
KSCKSEKSPEDLTVKSEKDKSFDGAADESTCLLCEDCPGDLNALPELKHYDPEHPAQPPP
PAPATEKPESSASSAGNGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELTKIADSVNLPL
DVVKKWFEKMQAGQIPGQSLEPPSPGPGSGNIPAKTEEQPQPVDGNEPQEDSTRGQSPLK
MTSSPVLPVGSAINGSRSCTSSPSPLNLSSARNPQGYSCVSEGTQEEPQVEPLDLSLPKQ
QGELLERSTVSSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPINI
AIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAMQEPPVKVIQ
PNGNQDERQDTSSEGVSVEDQNDSDCTPPKKKTRKAENGMYACDLCDKIFQKSSSLLRHK
YEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRY
SYCKRGAEDRDAMEQEDTGPEALPEVLPTELVGARASPSQADSDERESLTREEDEDSEKE
EEEEDKEMEELQEDKECENPQEEEEEEEEEEEEEEEEEEEEAEEAEHEAAAAKTGGAVEE
EAAQQAGSFQQKASGSESKRLSEEKTNEA
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaagcaaattcagattcggatgatgaagacaaactccat
attgtggaagaagaaagtgtcacagatgcagctgactgtgaaggtggtgtgccagatgat
gagctgccaacagaccagacagtgttaccaggaggcagtgacagggcgggcagtgccaag
aactgctggcaagacgacgtaaaagatgacgaatgcgactcagatgcagaaaacgagcaa
aaccatgatcccaacgtggaagagttcctgcagcaacaggacaccgcggtcatctaccct
gaggcacccgaggaggaccagcggcagggcacgccagaagccagcggtcatgatgacaat
ggaacaccagatgcattttcccagttgctcacctgcccgtattgtgatagaggctacaag
cgctttacctctttgaaagaacacattaagtaccgccatgagaagaatgaagacaacttc
agctgctccctgtgcagttacacctttgcatacagaacccagcttgaacgtcatatgaca
tcacataagtcaggaagagagcaaagacatgtgacacagtctggaggtaaccgtaagttc
aagtgcaccgagtgtgggaaagcgttcaagtacaaacaccatctgaaggagcacttacgg
atccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattct
ggctcttatagctcacacataagcagtaagaagtgtattagcttgatgcctgtgaatggt
aggcccagatcaggactcaagacatctcagtgttcctcgccatctctttcaacatcacca
ggcagtcccacacgcccacagatacggcagaagatagagaataaaccccttcaagaaccg
ctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggtt
gcttcaggaatcaactgttcaacccctttacaaaatggggtttttagcggtggtggccaa
ttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggt
ttggtatctcccataagtatcaacttaagtgacattcagaatgtacttaaagtggctgta
gatggtaacataatacgacaggttttggagaataatcaagccagtcttgcatccaaagag
caagaagccgtgagtgcttcatccatccagcagggcggccattctgtcatttctgccatc
agtcttcctttagttgatcaggatggcacaaccaaaatcatcatcaactacagtcttgag
cagcccggccaacttcaggttgttccccagaatctaaagaaagaaaacccagcccctcca
aagagctgcaaaagtgagaagtcaccagaagatcttactgtcaagtcagagaaggacaaa
agctttgatggggctgcggatgagagcacttgccttttgtgtgaggactgcccaggagac
ctcaatgcacttccagaactaaagcactatgacccagagcaccctgctcaacctccaccc
cctgccccagccaccgagaagccagagtcctctgcttcatcagccggcaatggagatttg
tctcccagtcagccacctttaaagaaccttctgtcgctcttaaaagcctactatgctctg
aatgcacagccaagcacagaagagctcaccaagattgccgattctgtgaacctgccgctg
gatgtagttaaaaagtggtttgaaaagatgcaagctggacagattcccgggcagtctctt
gaaccaccttctccaggaccggggtcaggaaacatccctgcaaaaactgaggagcagcct
caacctgtggatggaaatgagccccaggaagacagcacacgtggacagagtcctctcaag
atgacaagctctccagttttaccagtaggatcagccattaacggttccagaagttgcaca
tcatccccatcccctctaaacctttcctcagccaggaacccgcagggttactcttgtgtg
tcagagggtacccaggaggagccccaagtagaacctcttgatctctcactaccaaagcaa
cagggagagttactggaaaggtcgacagtcagtagcgtttaccagaacagtgtttattct
gtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggacagttgt
gttacagactcagaaccagttgtaaatgtagtcccaccaagtgccaaccccataaacatt
gctattcctacagtcactgcccagttacccacaatcgtggccatcgctgaccagaacagt
gttccgtgcttacgggcactcgctgccaacaagcagactattctgattccccaagtggca
tatacatactccgctacagtcagcccagccatgcaggagccaccagtgaaggtgatccag
ccaaatggaaaccaggatgaaagacaagacactagctcagaaggagtctccgtggaggac
cagaatgactctgactgcacgccacccaaaaagaaaactcggaaggcagagaatgggatg
tacgcatgtgacctgtgtgacaagatatttcagaagagcagctccctgctgagacacaaa
tatgagcatacaggtaagaggccccacgagtgcggaatctgtagaaaggcatttaaacac
aagcatcatttgattgagcacatgcgactgcactctggggaaaagccctaccaatgtgac
aagtgtggcaagcgcttctcacactcggggtcttactctcaacacatgaatcaccgctac
tcctactgcaagagaggagctgaagacagagatgccatggagcaggaagacactgggccg
gaagccctgccggaagtcctgcccactgagcttgttggtgcccgggcatctccctcacag
gctgactcggacgagagagaaagtttgacaagggaagaggatgaagacagtgaaaaggag
gaggaggaggaggataaagagatggaagaattgcaggaagacaaggaatgtgagaaccca
caggaggaggaggaggaggaagaggaggaagaagaagaggaggaggaggaagaggaagag
gaggcagaggaagctgagcatgaggcggcagcagccaagactgggggtgcagtggaggag
gaagcggctcagcaggcaggcagcttccagcagaaggccagcgggagcgagagcaagcga
ctgtctgaagagaagacaaatgaagcctag
DBGET
integrated database retrieval system
