Rattus norvegicus (rat): 259272
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Entry
259272 CDS
T01003
Symbol
Msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
259272 (Msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
259272 (Msi1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
259272 (Msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
259272
NCBI-ProteinID:
NP_683688
RGD:
628778
Ensembl:
ENSRNOG00000001156
UniProt:
Q8K3P4
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All DBs
Position
12:complement(46815225..46911852)
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AA seq
362 aa
AA seq
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METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGST
PSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNG
YH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagactgacgcgccccagcccggcctcgcctccccggactcgccgcacgacccctgc
aagatgttcatcggaggactcagttggcagaccacgcaggaagggctgcgcgaatacttc
ggccagttcggggaggtgaaagagtgtctggtgatgcgggaccccctgaccaaaagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtgctggcgcaa
tctcggcacgagctcgactccaaaacaattgaccccaaggtggcctttcctcggagagca
cagcctaagatggtcactcgaactaagaagatctttgtgggggggctgtctgtgaacacc
acggtggaggacgtgaagcactattttgagcagttcggaaaggtggatgatgccatgctg
atgttcgacaaaactaccaacaggcacagagggttcgggtttgtcacgttcgagagtgag
gacatcgtagagaaagtgtgtgagatccacttccatgaaatcaacaacaaaatggtggaa
tgcaagaaagctcagccaaaggaggtgatgtccccgacaggctcagcccggggccggtct
cgagtcatgccctacgggatggacgccttcatgctgggtattggcatgttaggttaccca
ggtttccaagccacgacctacgccagccggagttacacaggccttgcccctggttacacc
taccagttccccgaattccgtgtagagcggacccctctcccgagcgccccagtcctcccc
gagcttacagccatccctctcactgcttatggtccgatggcagcggcggcggcagcggcg
gctgtagtccgagggacaggctctcacccctggacgatggctccccctccaggttctact
cccagccgcacagggggcttcctggggaccacaagccccggccccatggctgagctctat
ggggcagccaaccaggactcgggggtcagcagttacatcagcgccgccagccccgccccc
agcactggttttggccacagtcttgggggtcccttgattgcgacagccttcaccaatggg
taccactga
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