Rattus norvegicus (rat): 260323
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Entry
260323 CDS
T01003
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform a
KO
K17936
sorting nexin-27
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
260323 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
260323 (Snx27)
Membrane trafficking [BR:
rno04131
]
Protein recycling
Others
Others
260323 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
260323 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
SNX17-31_F2_FERM
RBD
DarA_N
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
260323
NCBI-ProteinID:
NP_001103621
RGD:
628705
Ensembl:
ENSRNOG00000020893
UniProt:
Q8K4V4
A6K2S0
Structure
PDB
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All DBs
Position
2:complement(184824930..184907931)
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AA seq
539 aa
AA seq
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MADEDGEGIHPSAPHRNGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGATVTVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLF
TTEEEVLLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggattcacccctcagccccgcaccggaatggaggcggc
ggcggggggtctgggctccactgcgccgggaacggtggcgggggaggcggcggcccgcgg
gtcgtgcgcattgtcaagtccgaatccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggcgagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagaccccagtgacgactccttgggacaatcattttatgattacacagaaaagcaagca
gtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaaatttgtggta
tacaatgtttatatggccgggaggcagctgtgttctaagcggtaccgggagtttgccatt
ctgcaccaaaacctgaagagagagtttgccaactttacatttcctcgacttccaggaaag
tggccattctcattatcagagcaacagttagatgcccggcgtcgggggttggaagaatat
ctagaaaaggtgtgctccatccgagtcattggtgagagcgacatcatgcaggagttcctg
tcagaatctgatgagaattacaatggtgtgtctgatgtggagctgagagtagcattacca
gatggagcaactgttactgtcagagttaaaaagaacagcaccacagaccaagtgtaccag
gctattgcagcaaaggttggcatggacagtacaacagtgaactactttgccttatttgaa
gtcatcaatcattcctttgtacgtaagctggcccctaatgaatttcctcataaactgtac
gtccagaattacacatcagctgtgccaggcacctgcctgaccattcgcaagtggctcttt
accacagaagaagaagtcctcttaaatgacaatgaccttgctgtcacgtacttctttcat
caggctgttgatgatgtaaagaaaggttacattaaagcggaggagaagtcttaccagtta
cagaagctgtatgaacaaaggaagatggtcatgtacctcaacatgctaaggacctgtgag
ggctacaatgaaatcatcttccctcactgtgcctgcgactccaggaggaaggggcatgtt
atcacagccatcagcatcacgcactttaaacttcatgcctgcactgaagaagggcagctg
gagaaccaggtaatagcgtttgaatgggatgagatgcagcgatgggacacagacgaagaa
ggaatggccttctgttttgaatatgcacgaggagagaagaagcctcgatgggttaaaatc
ttcacaccatatttcaattacatgcatgagtgctttgagagggtgttctgcgagctcaag
tggagaaaagagaatattttccagatggcgaggtcacaacagagggatgtggccacctag
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