Rattus norvegicus (rat): 286761
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Entry
286761 CDS
T01003
Symbol
Vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
286761 (Vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
286761 (Vcpip1)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
286761 (Vcpip1)
Peptidases and inhibitors [BR:
rno01002
]
Cysteine peptidases
Family C64
286761 (Vcpip1)
Ubiquitin system [BR:
rno04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
286761 (Vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU1_UBXL
OTU
ubiquitin
Motif
Other DBs
NCBI-GeneID:
286761
NCBI-ProteinID:
NP_789827
RGD:
708520
Ensembl:
ENSRNOG00000006980
UniProt:
Q8CF97
A6JFG0
Structure
PDB
LinkDB
All DBs
Position
5:14317083..14343724
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AA seq
1221 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTSSSLAAAATPGGLSKRRDRRILSGSCPDPKCQARLFFP
ASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMG
LSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYG
KDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALREN
LKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHR
PIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLVGI
KGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVF
MDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVP
PEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDPVKDVLLPDYGLSNLTACNWC
HGTSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWEGKEYDNLPEAFPITLEWGGR
VVRETVYWFQYESDPSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNPD
DYTPVNIDGAHAQRIGDVQGQELESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIT
EQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRITT
NDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQ
HGDRITIEILKGKAEGGPSTAAHSAHTVRQEEIAVTGKLSSKELQEQADKEMYSLCLLAT
LMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLEL
CVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLHN
VTAFQGKGHSLGTASSNPHMDPRARETLAVRKHNTGTDFSNSSIKTEPPVFTAASSNSEL
IRIAPGVVTMRDGRQIDPDVVEAQRKKLQEMVSSIQASMDKHLRDQSTEQTPSDLSQRKV
EAVSSSVRPGNLQTGLPESFSLTGGTENLNTETTDSRVADVLGAAFATRSKAQKENSMEE
PEEMDSQDAETTNTTEPMDHS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgcctcctccgctgccgccgccgccgcctccccccgaggctccg
cagacttcgtcgtccctggcggcggcggctactccggggggcctttcgaaacgaagggac
cggagaatcctttccgggagctgcccggatcccaagtgccaggcgcggctcttcttcccg
gcctcaggttctgtcagcatcgagtgtaccgagtgcggacagcggcacgagcagcaacag
ctgctgggagtggaggaggtgaccgacccggacgtagtgctgcacaatctgctgcggaac
gcgctactcggggtgacgggggctcccaagaagaacacggaactggtaaaggtgatgggc
ctctccaactaccactgcaaattattgtcgcccatattggcacgctatggaatggacaaa
caaacgggccgcgccaagcttctccgggacatgaaccaaggcgaactgttcgattgcgcg
ttactcggtgaccgggccttcctcatcgaaccagagcacgtcaacacagtgggctatggc
aaggaccgatctggaagcctcctatatttgcatgacactctcgaggatatcaaacgggcc
aataaaagtcaagaatgccttattccagtgcatgtggatggggatggacactgcctagtg
catgctgtgtctagggctctagtaggccgagagctcttctggcatgccctgagggagaat
ctgaagcagcactttcagcagcacctagcccgatatcaagccctgtttcatgactttatt
gatgctgcagagtgggaggacattatcaatgaatgtgaccctctgtttgtgccacctgaa
ggtgtccccttaggcctgaggaatatccacatatttggccttgccaatgtgttacatcgt
cccataattctcttagattccctcagtggcatgagaagctctggtgattattcagccacc
tttctacctgggctcatacctgcagagaagtgcactgggagagatggtcatttgaacaag
ccaatctgtattgcgtggagtagctctggtagaaaccattatattcccttggtaggcata
aagggggctgccttgcccaaactacccatgaatttgctacctaaagcatggggtgtgcct
caggaccttattaaaaagtacatcaagcttgaggaggatggtggttgtgttattggagga
gacagaagtttgcaggataagtacttacttaggttggttgctgctatggaggaagtcttt
atggacaaacatggtatccatcctagtttggttgctgatgtacatcagtatttctacaga
aggactggggtgataggagttcagcctgaggaagttacagcagctgctaaaaaagcagta
atggataatcgccttcacaagtgtttgctttgtggtgccctttctgaacttcatgtccct
cctgagtggttggctccaggaggaaaactgtataacctggcaaaaagtactcatggacag
ctgaggcctgacaaaaattacagctttcctttaaacaatttggtttgttcatatgatcca
gtgaaagatgttctgttaccagactatggattgagtaatctaacagcttgtaattggtgc
catggcacatctgtgcgaagagtcagaggcgatggctctattgtatatttggatggagac
agaactaattctaggtctactggtggcaaatgtggttgtggattcaaacacttttgggaa
ggtaaagaatatgacaaccttccagaagcttttcctatcactttggagtggggaggaaga
gtagtcagagaaacagtatattggttccagtatgaaagtgatccatctttgaatagtaat
gtttatgatgttgcaatgaaacttgttaccaagcactttccaggtgaatttgggagtgag
atcctagttcagaaagttgtccacactatattgcatcagactgcaaaaaaaaatcctgac
gattacactcctgtaaatatagatggtgctcatgctcagagaattggagatgtgcaagga
caagaattggagtctcagctaccaactaaaattattcttactggacagaaaacaaaaact
ttgcacaaggaagaattaaacatgagtaaaactgaaagaactattcaacagaacatcaca
gaacaagcttctgtgatgcagaaacggaaaacagagaaattaaaacaagagcaaaagggg
caacccagaactgtttctccaagtactattcgtgatgggccttcatctgcacctgccacc
cccacgaaggctccctactcacctaccacttctaaggagaagaagattcgcataacaact
aatgatggacggcagtccatggttacccttaagtcttcaacaaccttttttgaacttcag
gaaagtatagccagagagttcaacattcctccatatttacagtgtattcgatatggtttt
cctcctaaagagttaatgccaccccaagcaggaatggaaaaggagccagttcctttgcag
catggtgacagaattaccatagagatcttaaaaggcaaagcagaaggtggtccatccact
gctgcacactcagcccacactgtgagacaagaagagattgctgttactggcaagctgtcc
tccaaggaacttcaggagcaagctgacaaagaaatgtattccttgtgtcttttagcaaca
ttaatgggagaagacgtgtggtcttatgcaaagggacttcctcacatgttccagcagggt
ggtgtattctacaatattatgaagaaaactatgggcatggctgatggcaaacattgtact
tttccacatctacctggcaaaacctttgtttataatgcttctgaagacagactggagttg
tgtgtcgatgccgcaggacatttccccattggtcctgatgttgaagatttagttaaagag
gctgtaagtcaggttcgagcagaggctactacaagaagtagggaatcaagcccttcacat
gggttattaaaactaggtagtggtggagtagtgaaaaagaagtctgagcaacttcacaat
gtaactgcctttcaggggaagggccattctctaggaactgcatccagtaacccgcacatg
gatcccagagctagggaaactctggctgtaagaaagcataatacagggacagattttagt
aatagttccattaaaacagagcctcctgtgttcacagctgcttctagtaatagtgagctt
attcgaatagctcctggagtggtaacaatgagagatggtaggcagattgatcccgatgtg
gttgaggcccagcgaaaaaaattgcaggaaatggtttcttctattcaggcatcaatggac
aagcacttgcgggatcaaagtacagagcaaacaccatctgatctttctcaaagaaaagta
gaagctgtgagttcttctgtgaggcctgggaatcttcagactggcttgcctgaatctttt
tctttaactggtggcactgagaatttgaatactgaaacaactgatagtcgtgtagcagat
gtactgggagcagcatttgccacaaggtcaaaagcacaaaaagaaaattccatggaggaa
cctgaagagatggatagtcaagatgctgagacaactaacacaactgagccgatggatcac
tcttga
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integrated database retrieval system