KEGG   Rattus norvegicus (rat): 287044
Entry
287044            CDS       T01003                                 
Symbol
Clec16a
Name
(RefSeq) protein CLEC16A
  KO
K19513  protein CLEC16A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    287044 (Clec16a)
   03029 Mitochondrial biogenesis [BR:rno03029]
    287044 (Clec16a)
Membrane trafficking [BR:rno04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    287044 (Clec16a)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    287044 (Clec16a)
SSDB
Motif
Pfam: CLEC16A_C FPL Flu_NS2 DUF6136
Other DBs
NCBI-GeneID: 287044
NCBI-ProteinID: NP_001385480
RGD: 1305773
Ensembl: ENSRNOG00000057378
LinkDB
Position
10:complement(5434725..5631246)
AA seq 1032 aa
MFGRSRSWVGGGHGKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
HPESMVRIAVRTITLNVYKVDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDNCVQTDE
EHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVHSLENPDKG
GERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSETYTKPAQDAPRSSAKPSI
RCFIKPTETLERSLEMNKHKGKKRMQKRPNYKNVGEEEDEERGSAEDAQEDAEKTKEIEM
VIMKLGKLSEVATAGASVQEQNTTDEEKSAATSSENAQWSRPFLDMVYHALDSPDDDYHA
LFVLCLLYAMSHNKGMDPEKLKRIQLPVPSEAEKTTYNHLLAERLIRIMNNAAQPDGRIR
LATLELSCLLLKQQVLTSSGCVIKDVHLACLEGAREESVHLVRHFYKGEEIFLDMFEDEY
RSMTIKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSL
QLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDGGMVQRFLAVDIYQMSLVE
PDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASSPHSKPFPILQATFVFSDH
IRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGFGLCSTSSQHLPFRFYEQC
RRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSPSPPFASGSPGGSGSTSHCDS
GGSSSAPSATQSPADAPTTPEQPQPHLDQSVIGNEVDVNSKPSKNSSARSSEGETMHLSP
SLLPAQQPTISLLYEDTADTLSVESLTLVPPVDPHSLRALSGISQLPAMAAADSETPAEG
AVSPEPAGPTEH
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgtttggccgctcacggagctgggtgggcgggggccacggcaagtcctcccgcaacatc
cactccttggaccacctgaagtacctgtaccatgttttaaccaaaaacaccactgtcaca
gaacagaaccggaacctgcttgtggagaccatccgttccatcactgagatcctgatttgg
ggcgatcaaaatgacagctctgtgtttgacttcttcttggagaagaacatgtttgttttc
ttcttgaacattctgcggcagaaatcaggccgttatgtgtgtgtccagctgctacagacc
ctgaacattctctttgagaacatcagccacgagacatcactctattatttgctgtctaat
aactatgtaaattcgatcattgtccataaatttgacttttccgacgaggagatcatggcg
tattatatatcattcctgaaaacactttcattaaagctcaacaaccacactgtccatttc
ttttacaatgagcacaccaatgactttgccctgtacacagaagccatcaagttcttcaat
catcctgaaagtatggttcgaattgctgtgagaaccatcaccttgaatgtctacaaagtg
gataatcaggccatgctgcactacatcagagacaaaaccgctgtcccatacttctccaat
ttggtctggttcattgggagccacgtgattgaacttgacaactgtgtacagacagatgag
gagcaccggaatcgggggaagctgagtgacctagtggctgagcacctggaccacctgcac
tacctcaatgacatcctgatcatcaactgtgagttcctcaacgacgtgctcacagaccac
ctgctcaacaggctcttcctgcctctctacgtccactccctggagaatcccgacaaggga
ggagaacggccgaaaatcagcctgcctgtgtccctctatcttctctcccaggtcttcctc
attatacatcatgccccgctggtgaactctctggctgaagtcattctgaatggcgatctg
tctgagacatatacgaagcctgcacaggatgctcccagaagttctgccaagcccagcatc
cgttgcttcattaagcccactgagacactggagcggtcccttgagatgaacaagcacaag
ggcaagaagcggatgcaaaagagacccaactacaaaaacgttggggaggaggaagacgag
gagagagggtctgcagaagatgcccaggaagacgctgagaagactaaagagattgagatg
gtgatcatgaagcttggcaagctctcagaggtggccactgccggggcctcggtgcaggag
cagaacaccacagacgaggagaagagcgctgccacgagctcagagaacgcacagtggagc
agacccttcctggatatggtgtaccatgccctggacagccctgacgatgattatcatgcc
ctcttcgtgctctgcctcctctatgccatgtctcataacaaaggcatggatcctgaaaaa
ctaaaacgaatccagctcccagtgccaagtgaagctgagaaaaccacctacaaccatctg
ctggcagagagactcatcaggatcatgaacaatgctgcccaaccagatggcaggatccgg
ctggctacactggagctgagctgcctgctcctgaagcagcaagtactgaccagctctggc
tgtgtcatcaaggatgtgcatctggcctgcctggagggtgcaagagaagagagtgtccac
cttgtacgtcatttctataagggagaagagatttttttggacatgtttgaagatgaatac
aggagcatgacaataaagcccatgaatgtagagtatctcatgatggatgcttccatcctc
ctgcccccaacgggcactccactgactggcatcgactttgtgaagcggctgccatgtggt
gatgtggagaagacacggcgggccatccgggtattcttcatgctgcgatccctgtcactg
cagctgcgaggggaacctgagacccagttgccactgactcgagaggaggacctgatcaaa
acagacgatgtcttggatctgaataacagtgacttgattgcatgcacagtcatcaccaag
gatggcggtatggtccagaggttcctggctgtggacatttaccagatgagcctggtggag
cctgacgtgtccagactcggctggggagtggttaagtttgctggccttctgcaggacatg
caggtgacaggagtggaggatgacagccgcgccctgaacatcaccatccacaagcctgcc
tccagcccgcactctaagcccttccctatcctgcaggccacctttgtgttctctgaccac
atccgctgcattattgccaagcagcgcctagccaagggccgcatccaggccaggcgcatg
aagatgcagaggatagccgcccttctggacctcccaatccagccgacaacggaagtcctg
ggatttggactctgctccacctcctcccagcacctgcccttccgtttctatgagcagtgc
cgccgaggcagcagtgaccccacagtgcaacgctctgtgtttgcgtcggtagacaaggtg
ccaggctttgctgtggcccagtgcataaaccagcatagctctccgtccctgtcatcgccc
tcaccaccatttgccagcgggagccccggtggcagcgggagcaccagccactgtgactca
ggaggctcctcctctgcaccctcagcaactcagagcccggcagatgcccccacaactcca
gaacagcctcagcctcacctagaccagtcagtgattgggaatgaagtagatgtcaactcc
aagcccagcaagaactcgtcagccaggagctctgaaggggagaccatgcacctgtccccc
agcctcctccccgcccagcagcccaccatctccttgctctacgaggacactgctgacaca
ctgagtgttgagtcgctgacccttgtcccccccgtcgatccccacagccttcgagccctc
tctggcatctcccagctccccgcaatggctgcagcagattcggagaccccagctgagggt
gctgtaagcccagagcctgcgggccccacagagcactga

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