Rattus norvegicus (rat): 287044
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Entry
287044 CDS
T01003
Symbol
Clec16a
Name
(RefSeq) protein CLEC16A
KO
K19513
protein CLEC16A
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
287044 (Clec16a)
03029 Mitochondrial biogenesis [BR:
rno03029
]
287044 (Clec16a)
Membrane trafficking [BR:
rno04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
287044 (Clec16a)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
287044 (Clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
287044
NCBI-ProteinID:
NP_001385480
RGD:
1305773
Ensembl:
ENSRNOG00000057378
LinkDB
All DBs
Position
10:complement(5434725..5631246)
Genome browser
AA seq
1032 aa
AA seq
DB search
MFGRSRSWVGGGHGKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
HPESMVRIAVRTITLNVYKVDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDNCVQTDE
EHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVHSLENPDKG
GERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSETYTKPAQDAPRSSAKPSI
RCFIKPTETLERSLEMNKHKGKKRMQKRPNYKNVGEEEDEERGSAEDAQEDAEKTKEIEM
VIMKLGKLSEVATAGASVQEQNTTDEEKSAATSSENAQWSRPFLDMVYHALDSPDDDYHA
LFVLCLLYAMSHNKGMDPEKLKRIQLPVPSEAEKTTYNHLLAERLIRIMNNAAQPDGRIR
LATLELSCLLLKQQVLTSSGCVIKDVHLACLEGAREESVHLVRHFYKGEEIFLDMFEDEY
RSMTIKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSL
QLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDGGMVQRFLAVDIYQMSLVE
PDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASSPHSKPFPILQATFVFSDH
IRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGFGLCSTSSQHLPFRFYEQC
RRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSPSPPFASGSPGGSGSTSHCDS
GGSSSAPSATQSPADAPTTPEQPQPHLDQSVIGNEVDVNSKPSKNSSARSSEGETMHLSP
SLLPAQQPTISLLYEDTADTLSVESLTLVPPVDPHSLRALSGISQLPAMAAADSETPAEG
AVSPEPAGPTEH
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccgctcacggagctgggtgggcgggggccacggcaagtcctcccgcaacatc
cactccttggaccacctgaagtacctgtaccatgttttaaccaaaaacaccactgtcaca
gaacagaaccggaacctgcttgtggagaccatccgttccatcactgagatcctgatttgg
ggcgatcaaaatgacagctctgtgtttgacttcttcttggagaagaacatgtttgttttc
ttcttgaacattctgcggcagaaatcaggccgttatgtgtgtgtccagctgctacagacc
ctgaacattctctttgagaacatcagccacgagacatcactctattatttgctgtctaat
aactatgtaaattcgatcattgtccataaatttgacttttccgacgaggagatcatggcg
tattatatatcattcctgaaaacactttcattaaagctcaacaaccacactgtccatttc
ttttacaatgagcacaccaatgactttgccctgtacacagaagccatcaagttcttcaat
catcctgaaagtatggttcgaattgctgtgagaaccatcaccttgaatgtctacaaagtg
gataatcaggccatgctgcactacatcagagacaaaaccgctgtcccatacttctccaat
ttggtctggttcattgggagccacgtgattgaacttgacaactgtgtacagacagatgag
gagcaccggaatcgggggaagctgagtgacctagtggctgagcacctggaccacctgcac
tacctcaatgacatcctgatcatcaactgtgagttcctcaacgacgtgctcacagaccac
ctgctcaacaggctcttcctgcctctctacgtccactccctggagaatcccgacaaggga
ggagaacggccgaaaatcagcctgcctgtgtccctctatcttctctcccaggtcttcctc
attatacatcatgccccgctggtgaactctctggctgaagtcattctgaatggcgatctg
tctgagacatatacgaagcctgcacaggatgctcccagaagttctgccaagcccagcatc
cgttgcttcattaagcccactgagacactggagcggtcccttgagatgaacaagcacaag
ggcaagaagcggatgcaaaagagacccaactacaaaaacgttggggaggaggaagacgag
gagagagggtctgcagaagatgcccaggaagacgctgagaagactaaagagattgagatg
gtgatcatgaagcttggcaagctctcagaggtggccactgccggggcctcggtgcaggag
cagaacaccacagacgaggagaagagcgctgccacgagctcagagaacgcacagtggagc
agacccttcctggatatggtgtaccatgccctggacagccctgacgatgattatcatgcc
ctcttcgtgctctgcctcctctatgccatgtctcataacaaaggcatggatcctgaaaaa
ctaaaacgaatccagctcccagtgccaagtgaagctgagaaaaccacctacaaccatctg
ctggcagagagactcatcaggatcatgaacaatgctgcccaaccagatggcaggatccgg
ctggctacactggagctgagctgcctgctcctgaagcagcaagtactgaccagctctggc
tgtgtcatcaaggatgtgcatctggcctgcctggagggtgcaagagaagagagtgtccac
cttgtacgtcatttctataagggagaagagatttttttggacatgtttgaagatgaatac
aggagcatgacaataaagcccatgaatgtagagtatctcatgatggatgcttccatcctc
ctgcccccaacgggcactccactgactggcatcgactttgtgaagcggctgccatgtggt
gatgtggagaagacacggcgggccatccgggtattcttcatgctgcgatccctgtcactg
cagctgcgaggggaacctgagacccagttgccactgactcgagaggaggacctgatcaaa
acagacgatgtcttggatctgaataacagtgacttgattgcatgcacagtcatcaccaag
gatggcggtatggtccagaggttcctggctgtggacatttaccagatgagcctggtggag
cctgacgtgtccagactcggctggggagtggttaagtttgctggccttctgcaggacatg
caggtgacaggagtggaggatgacagccgcgccctgaacatcaccatccacaagcctgcc
tccagcccgcactctaagcccttccctatcctgcaggccacctttgtgttctctgaccac
atccgctgcattattgccaagcagcgcctagccaagggccgcatccaggccaggcgcatg
aagatgcagaggatagccgcccttctggacctcccaatccagccgacaacggaagtcctg
ggatttggactctgctccacctcctcccagcacctgcccttccgtttctatgagcagtgc
cgccgaggcagcagtgaccccacagtgcaacgctctgtgtttgcgtcggtagacaaggtg
ccaggctttgctgtggcccagtgcataaaccagcatagctctccgtccctgtcatcgccc
tcaccaccatttgccagcgggagccccggtggcagcgggagcaccagccactgtgactca
ggaggctcctcctctgcaccctcagcaactcagagcccggcagatgcccccacaactcca
gaacagcctcagcctcacctagaccagtcagtgattgggaatgaagtagatgtcaactcc
aagcccagcaagaactcgtcagccaggagctctgaaggggagaccatgcacctgtccccc
agcctcctccccgcccagcagcccaccatctccttgctctacgaggacactgctgacaca
ctgagtgttgagtcgctgacccttgtcccccccgtcgatccccacagccttcgagccctc
tctggcatctcccagctccccgcaatggctgcagcagattcggagaccccagctgagggt
gctgtaagcccagagcctgcgggccccacagagcactga
DBGET
integrated database retrieval system