Rattus norvegicus (rat): 287070
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Entry
287070 CDS
T01003
Symbol
Nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
287070 (Nlrc3)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
287070 (Nlrc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
AAA_16
NPHP3_N
AAA_25
AAA_14
AAA_19
Motif
Other DBs
NCBI-GeneID:
287070
NCBI-ProteinID:
XP_006245896
RGD:
1304902
Ensembl:
ENSRNOG00000024210
UniProt:
A0A8I5ZRD5
LinkDB
All DBs
Position
10:12055809..12093449
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AA seq
1090 aa
AA seq
DB search
MGQAAGELQTSSRLWRRSVSSFWLQTQDSMRKQEVWTDRETCWAKNAGSPAEQVKTLVDL
LAGKGSQLLLACNKMPDSPVGSQSNESRLQKHCEALLSRVGNDPELGSPSHQLASLILVE
GLTDLQLKEHDFTQVEAARGVWRPGRAITLDRLFLPLSRVSIPPRVSVTIGVAGVGKTTL
VRHFVRCWARGQVGKGFSWVLPLTFRDLNTYEKLSADKLIYSIFSNAGEAGAVTAPDRAL
LVLDGLDECKTPLEFSNTVACTDPKKEIQVDHLITNIIRGNLFPEISVWITSRPSAAGQI
PGGLVDRMTEIRGLTEEEIKVCLEQMFPEDQNLLGQVLSQVQANRGLYLMCTIPAFCRLT
GLALGHLYRTRLAVQDAELPLPQTLCELYSWYFRMALGGEGQDKGKVSPRIEQVMQGARK
MVGTLGRLAFHGLVKKKYVFYEQDMKAFGVDLALLQSSLCSCLLQREETLASSVAYCFTH
LSLQEFMAATYYYSASKRAIFDLFTESGMSWPRLGFLTHFRCAVQRATQAKDGRLDVFLR
FLSGLLSPRVNALLAGSLLAQGEHQSYRNQVAEVLQGFLHPDTAVCARAINILYCLSELR
HTDLARSVEEAMRSGTLAGMTSPPHRTALAYLLQMSDICSWEADFSLCLSQRVLQSLLPQ
LLYCQSLRLDNNQFQDPVMELLGSVLSGKDCRIQKISLAENQIGNKGARGLARSLLVNRS
LVTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAEALVSNQIISTL
QLQKNLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQS
NAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLLH
DQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGA
SSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRTLEILDLRGNDVGVAGAKALA
NGLKLNSSLRRLNLQENSLGMDGAIYVATALSENHGLHHINLQGNPIGESGARMISQAIE
KNAPTCTVEM
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggccgcaggagagcttcaaacaagcagccggctgtggcgaaggagtgtgagc
agcttctggctgcaaacacaagactccatgaggaagcaagaggtgtggacagacagagag
acatgctgggccaagaatgctggctccccagctgagcaggtgaaaactcttgtggatctg
ttggctgggaagggcagtcagctgctactggcctgtaacaaaatgccagattccccagtg
ggatctcaaagcaatgagtcaaggctacaaaagcactgtgaggctctgttgagcagggtg
ggaaatgacccagaactgggcagtccctcacaccaactggccagcctcattctggtagag
ggtctgacagacctacagctgaaggagcatgacttcacacaggtggaggccgcacgtggg
gtctggcgccctggcagagccatcaccctggataggctctttttacctctgtctcgggtg
tctatcccacctcgggtgtctgtcaccattggagtggctggcgtgggcaagaccacgcta
gtgaggcattttgttcgttgctgggccagaggacaagtgggcaagggcttctcatgggtt
ctgcccttgacctttcgcgatctgaatacctatgagaaactgtctgcagacaaactcatc
tactccatcttctcaaacgctggggaagctggggcggtgacagctccagatagagccctc
ctggtcctggatggcttggatgagtgtaagacacccctggaattctccaataccgtggcc
tgcacagacccaaagaaggagatccaggtagaccacctgatcactaacattatccgaggc
aacctctttccagaaatttctgtctggatcacctcccggcccagtgctgctggtcagatc
cccgggggcctagtggaccggatgaccgagattcggggtcttactgaggaagagatcaag
gtgtgtctggagcagatgtttcctgaggaccagaacctcttaggccaggtcctgagtcaa
gttcaggccaacagaggtctgtatctgatgtgcaccataccagccttttgcaggctcacg
gggctggccttgggtcacttgtaccgcaccaggctggctgtccaagatgcagagctgccg
ttgcctcagaccctgtgtgagctctactcctggtactttaggatggctcttggtggggag
gggcaggataaaggaaaggtaagccctaggatcgagcaggtaatgcagggcgctcgcaaa
atggtggggacactgggccgcctggcctttcatgggctggtcaagaagaaatacgtgttt
tatgagcaagacatgaaggcgtttggagtggacctcgccttgctacagagcagcctgtgc
agctgcctcctgcagcgggaagagaccctggcctcctcagtagcttactgcttcactcac
ctgtctctgcaagaattcatggcggctacatactactacagtgcatccaagagggccatc
ttcgacctcttcactgagagtggcatgtcctggcccaggctgggcttcctcacccacttc
agatgtgcagtgcagcgggccacacaagccaaggatgggaggctagatgtgttcctgcgc
tttctctctggcctcttgtccccaagggtcaatgctctgctggccggctccctgctggcc
caaggtgagcaccagagctaccggaaccaggtggctgaggtcctacaaggcttcctccat
cccgacaccgcagtctgcgcacgtgccatcaacatcttgtactgcctgagtgagctgcgg
cacacggacctggcccgcagtgtggaggaggccatgcggagtgggaccttggctgggatg
accagtccgccacaccgcactgccctggcctacctcctgcagatgtctgatatctgctcc
tgggaggccgacttctccctgtgcctcagccagcgtgtcctccagagcctgctgcctcag
ctgctctattgtcagagcctcaggctggacaacaaccagtttcaggaccctgtgatggag
ttgctgggcagtgtgctgagtgggaaggactgtcgcattcaaaagatcagcctggctgag
aatcagattggtaacaaaggagccagaggtctggccagatccctcctggtcaacagaagc
cttgtcacactagaccttcggagtaacagcattggaccacagggggctaaggctctggca
gacgctctgaagataaacagaactctcacttctctaagccttcaaagcaacgtgatcaag
gatgatggtgtcatgtacatggctgaggccctggtctccaaccagatcatctctacgcta
cagctacagaagaacctaattgggcccagaggagcccagcagatggcagatgccctgaag
aagaacaggagtctgagagaactcatgttttccagtaataccattggggacagaggtgcc
atggccctggctgaggccctgaaggtgaaccagggcctggagaacctggacctacagagc
aatgccatcagtaacacgggagtggcagtgctgatgcgagccctctgcactaaccagaca
ctctccagtctcaacttaagagaaaactccatcagcccagagggagcccaggccctcgct
caagctctctgcaggaacaccactctgaagcacttggacctgacagctaatctcctccat
gaccaaggtgcccaggccattgccacagcagtgggagaaaactgctccctcacacacctt
cacctgcagtggaatttcatccaggctggtgcagccagggccctgggacaagcactccag
ctgaacaggaccctgactaccttagacttacaggagaatgccataggggatgagggcgct
tcctcagtggccggcgcactgaaggtgaacacaaccctcactgctctctacctacaggtg
gcctccattggtagtcaaggggcccaggcacttggggaggccctggctgtgaacagaacc
ttggagattcttgacttacgaggaaacgatgttggggtagctggagccaaggccttggca
aatggtctgaagttaaactccagtctccgaagactcaatctccaagagaactcactgggg
atggacggggccatatatgttgccactgcactctctgagaaccatggtctgcatcatatt
aatctccagggaaatcccattggggaatctggtgccaggatgatctcacaggctatcgag
aagaacgctcccacatgcactgtggaaatgtaa
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integrated database retrieval system
