KEGG   Rattus norvegicus (rat): 287098
Entry
287098            CDS       T01003                                 
Symbol
Cldn6
Name
(RefSeq) claudin-6 precursor
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03272  Virion - Hepatitis viruses
rno04382  Cornified envelope formation
rno04514  Cell adhesion molecule (CAM) interaction
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    287098 (Cldn6)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    287098 (Cldn6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    287098 (Cldn6)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    287098 (Cldn6)
  09158 Development and regeneration
   04382 Cornified envelope formation
    287098 (Cldn6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    287098 (Cldn6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    287098 (Cldn6)
   04147 Exosome [BR:rno04147]
    287098 (Cldn6)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   287098 (Cldn6)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   287098 (Cldn6)
  Exosomal proteins of colorectal cancer cells
   287098 (Cldn6)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like Borrelia_P13
Other DBs
NCBI-GeneID: 287098
NCBI-ProteinID: NP_001095834
RGD: 1308837
Ensembl: ENSRNOG00000003654
UniProt: A0A8I5ZNF5 B4F7F0
LinkDB
Position
10:13213837..13218578
AA seq 219 aa
MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLI
SGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGL
LCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcctctactggtctgcaaatcttggggattgtcctgaccctgcttggctgggtcaac
gccctggtgtcctgtgccctgccgatgtggaaggtgaccgccttcatcggcaacagcatc
gttgtggcccagatggtgtgggaggggctatggatgtcctgtgtggtccagagcactggt
cagatgcagtgcaaggtgtacgactcgctgctggcgctgccccaggacctgcaggctgcc
agagccctctgtgtcatcaccctcctcattgtcctgcttggcctactcctgtaccttgcc
ggagccaagtgcactacctgtgtggaagacaagaattccaagtctcgtctggtgctcatc
tctggtgtcatcttcgtcatctccggggtcctgaccctcattcccatctgctggactgcc
cacgccatcatccaggacttctacaaccccttggtcgcagacgctcaaaagcgagagcta
ggggcctccctctacctgggttgggccgcctcaggccttttgctgataggtggagggctg
ctatgctgcgcctgctcttctggagggacccagggacccagccattatgtggcccgctat
tcttcgcctgtcccacattctcggggaccctccgaatacccctccaagaattatgtctga

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