Rattus norvegicus (rat): 287098
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Entry
287098 CDS
T01003
Symbol
Cldn6
Name
(RefSeq) claudin-6 precursor
KO
K06087
claudin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03272
Virion - Hepatitis viruses
rno04382
Cornified envelope formation
rno04514
Cell adhesion molecule (CAM) interaction
rno04530
Tight junction
rno04670
Leukocyte transendothelial migration
rno05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
287098 (Cldn6)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
287098 (Cldn6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
287098 (Cldn6)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
287098 (Cldn6)
09158 Development and regeneration
04382 Cornified envelope formation
287098 (Cldn6)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
287098 (Cldn6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
287098 (Cldn6)
04147 Exosome [BR:
rno04147
]
287098 (Cldn6)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Stereociliary proteins
287098 (Cldn6)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
287098 (Cldn6)
Exosomal proteins of colorectal cancer cells
287098 (Cldn6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Borrelia_P13
Motif
Other DBs
NCBI-GeneID:
287098
NCBI-ProteinID:
NP_001095834
RGD:
1308837
Ensembl:
ENSRNOG00000003654
UniProt:
A0A8I5ZNF5
B4F7F0
LinkDB
All DBs
Position
10:13213837..13218578
Genome browser
AA seq
219 aa
AA seq
DB search
MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLI
SGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGL
LCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcctctactggtctgcaaatcttggggattgtcctgaccctgcttggctgggtcaac
gccctggtgtcctgtgccctgccgatgtggaaggtgaccgccttcatcggcaacagcatc
gttgtggcccagatggtgtgggaggggctatggatgtcctgtgtggtccagagcactggt
cagatgcagtgcaaggtgtacgactcgctgctggcgctgccccaggacctgcaggctgcc
agagccctctgtgtcatcaccctcctcattgtcctgcttggcctactcctgtaccttgcc
ggagccaagtgcactacctgtgtggaagacaagaattccaagtctcgtctggtgctcatc
tctggtgtcatcttcgtcatctccggggtcctgaccctcattcccatctgctggactgcc
cacgccatcatccaggacttctacaaccccttggtcgcagacgctcaaaagcgagagcta
ggggcctccctctacctgggttgggccgcctcaggccttttgctgataggtggagggctg
ctatgctgcgcctgctcttctggagggacccagggacccagccattatgtggcccgctat
tcttcgcctgtcccacattctcggggaccctccgaatacccctccaagaattatgtctga
DBGET
integrated database retrieval system